FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F4_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F4_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG22.7027027027027026No Hit
GAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTGCAAGGGGACGTAG11.3513513513513513No Hit
GGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAAC11.3513513513513513No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA11.3513513513513513No Hit
CCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTC11.3513513513513513No Hit
TACCTTCTCTTCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGT11.3513513513513513No Hit
TGATACTACTAAGGGCTTTCACTGAGGAGTGAGCAATAGTTTGAGAAATT11.3513513513513513No Hit
GATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGT11.3513513513513513No Hit
AATCAGGCATGAAAACAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTA11.3513513513513513No Hit
AGTAGAAACACGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATC11.3513513513513513No Hit
GTGGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGAATCG11.3513513513513513No Hit
GAACTACTAGTATTGCCTTCATTTTTGTTGCTTTTGTTTTCCCCTGCTTT11.3513513513513513No Hit
GAATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGGAATCG11.3513513513513513No Hit
GTTCTTTTCCATGATCGCCTGGTCCAAACGCACGCAAAGAGGGCCTATTA11.3513513513513513No Hit
GCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAG11.3513513513513513No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC11.3513513513513513No Hit
TCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTT11.3513513513513513No Hit
GTGTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGAGTCTGGACGGAT11.3513513513513513No Hit
GCTATAAACATTTTCAACCGCAAATTCAGACACAATATGTATAGGTTATC11.3513513513513513No Hit
TGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGGAGGTTGCTAATCAG11.3513513513513513No Hit
GTTCCAGGTTCCAGGTCGTCCCTAAGTGCCTGAACAATGAGAAGCAATTT11.3513513513513513No Hit
AAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAAT11.3513513513513513No Hit
CACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAAC11.3513513513513513No Hit
GTCCCGCACTCGCGAGATACTCAATAAGACCACTGTGGACCATATGGCCA11.3513513513513513No Hit
GAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACAA11.3513513513513513No Hit
CTTTTCTAGTACTGTGTCTACAGTGTCTGTTGAATTGTTCGCATGATAAC11.3513513513513513No Hit
CACGCTCACCGTGACCAGTGAGCGAGGACTGCAGCGTAGAAGCTTTGTCC11.3513513513513513No Hit
GTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTA11.3513513513513513No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA11.3513513513513513No Hit
TCATTGGATTGAAGCATTGTCGCACAAAGTCTTCCATTTTGGATCAGTAC11.3513513513513513No Hit
GTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGAATCTAGAAAA11.3513513513513513No Hit
CAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACACAGAATGA11.3513513513513513No Hit
CAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCT11.3513513513513513No Hit
CAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCA11.3513513513513513No Hit
GTATAAGGGAATGTGGTGCTTATGGCATTTTGCGCTGGAATTTTTCTGTC11.3513513513513513No Hit
GCTCTTATCTCTTGTTCTACTTCAAGCAGTAGTTGTAAGGCTTGCATAAA11.3513513513513513No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACT11.3513513513513513No Hit
GGTGTCTAGGGCCCGGATTGATGCCAGGGTCGACGTCGAGTCTGGACGGA11.3513513513513513No Hit
AGTAGAAACAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCAT11.3513513513513513No Hit
CAATATGGCCATAATCAAAGAGTACACATCAGGAAGGCAAGAGAATAACC11.3513513513513513No Hit
CAATTACAGCAGACAAGAGAAAAATGGACGATATGCCCCATCATTAACAA11.3513513513513513No Hit
TGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGC11.3513513513513513No Hit
CACAGAGACTGGTGCACCCCAGCTCAACCCGATTGATGGACCACTACCTG11.3513513513513513No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG11.3513513513513513No Hit
TCATATAGGAGACCGGTTGGAATTTCTAGCATGGTGGAGGCCATGGTGCT11.3513513513513513No Hit
ATACCCAAAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC11.3513513513513513No Hit
GGCCATGGAGGTTGATAATCAGACTAGTCAAATGGTACATGCAATGAGAA11.3513513513513513No Hit
CCACTGTGGAACATATGTCCATAAACAAAAACTACACATCAGTAATTCAA11.3513513513513513No Hit
CACATCAATATCTTAAAAAAAACTAAATCACACAAACGAACTTTATATCT11.3513513513513513No Hit
GTATGGAGGATCTCCAGTATAATGGAATGTGGTGCTTATGGCATTTTGAG11.3513513513513513No Hit
TTTCAGACCAGCACTGGAGCTAGGATGAGTCCCAATAGTCCTCATTGCAT11.3513513513513513No Hit
GGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAATAGTC11.3513513513513513No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT11.3513513513513513No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA11.3513513513513513No Hit
GCCTCCACCATGCTAGAAATTCCAACCGGACTCCTATATGAAATGCTAGT11.3513513513513513No Hit
GATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCCAATGATCGTC11.3513513513513513No Hit
AAATAAAATATAACCAATAAATAAAAATAAACAAAAATACTAAAAAAAAC11.3513513513513513No Hit
ATACTGGAGATCCTCCATACAGCCATGGAAAAGGAACAGGATACACCATG11.3513513513513513No Hit
ATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATAGCTCAGTTCATTGAT11.3513513513513513No Hit
CTCACAGACAGATGGCTACTACCACCAATCCACTAATCAGGCATGAAAAC11.3513513513513513No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG11.3513513513513513No Hit
AAAGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAAT11.3513513513513513No Hit
CCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGA11.3513513513513513No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAAGGCTAATGTGCTAATT11.3513513513513513No Hit
GAGTACTGTGTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAG11.3513513513513513No Hit
CACAGTACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACCTGTCTC11.3513513513513513No Hit
CTAACAAGTTTGCTGCAATATGCACACATTTGGAAGTTTGTTTCATGTAT11.3513513513513513No Hit
GTCAAGATGCAATTTTCATTATAATTGTATCTCTTGATTCCTCTTTCAAT11.3513513513513513No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATG11.3513513513513513No Hit
GTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGT11.3513513513513513No Hit
ATTAGAGCACATCCAGAAACTAATTGCCCCCAGGGAGACTACCAGTACCA11.3513513513513513No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG11.3513513513513513No Hit
GAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAA11.3513513513513513No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)