FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_F10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCATACACACAAGCAGGCAGGCAGGATTTATGTGCAACTGATCCCCTCA111.11111111111111No Hit
GTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCATTCCACGAT111.11111111111111No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCT111.11111111111111No Hit
GCTTTGAGGGGGCCTGACGGGATGATAGAAAGAACGTACGTTTCGACCTC111.11111111111111No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA111.11111111111111No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT111.11111111111111No Hit
CTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAATCCAGC111.11111111111111No Hit
GCAACATGCCATAAGCACCACATTCCCTTATACTGGAGATCCTCCATACA111.11111111111111No Hit
GTCCAGCCAAAAGCATGGAATATGATGCCGTTGCAACTACACATTCCTGG111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)