FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA23.7735849056603774No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC23.7735849056603774No Hit
TTTTAAAACAAAAAGAAAACAAATACAAGCACACAACAAATCTATTTGAA11.8867924528301887No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAA11.8867924528301887No Hit
GTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACAACGTCCCC11.8867924528301887No Hit
AATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGG11.8867924528301887No Hit
GAGAAATCTAACAAAAAGAGAGAACGATAAAATCAAAATAAGGCACACTC11.8867924528301887No Hit
GGTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAAC11.8867924528301887No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC11.8867924528301887No Hit
CATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATG11.8867924528301887No Hit
AAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAA11.8867924528301887No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA11.8867924528301887No Hit
ATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTT11.8867924528301887No Hit
ATCATATACAACATAGATTAAAATGCAAAAAAAGAATATTCCTAATAAAA11.8867924528301887No Hit
GTCCAGTGTCCATCAAAGTCCAAGTGCCCAACATGCAGGATAAGACTGAA11.8867924528301887No Hit
AATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCA11.8867924528301887No Hit
CCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGCAATGACTGAAGAT11.8867924528301887No Hit
CCATATGGCCATAATCAAAAATTAAACATAAGTAAGGAAATATAAGAACC11.8867924528301887No Hit
CTAAGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA11.8867924528301887No Hit
AAATTAAAAAATAAAGACAAAATAAAAAAGTAAAAAACATTCACTAAAGA11.8867924528301887No Hit
CTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTG11.8867924528301887No Hit
CACACACACACACACACACACACACACACACCCCAAATGTATATATGTGC11.8867924528301887No Hit
ATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGA11.8867924528301887No Hit
GCTGCCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGG11.8867924528301887No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.8867924528301887No Hit
AATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGG11.8867924528301887No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACT11.8867924528301887No Hit
GGACCATGTGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGA11.8867924528301887No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAAAGTCC11.8867924528301887No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACCTGTCTCTT11.8867924528301887No Hit
AGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTG11.8867924528301887No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCC11.8867924528301887No Hit
GGATGATGGCAATGAGATACACAATTACATCACACAATAGAATAATTCAC11.8867924528301887No Hit
CCTTTGAAAATGTCCTGTTTGCTTAGTTTTTATGACAGTACCAGCTGATC11.8867924528301887No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGA11.8867924528301887No Hit
CAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCC11.8867924528301887No Hit
GTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCC11.8867924528301887No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT11.8867924528301887No Hit
CAATTAAAGAATACAATATAATAATCAAAAACAAAACATAGACCAATTAA11.8867924528301887No Hit
GGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGC11.8867924528301887No Hit
AAACAACAAATAAAACCACAGAGAAAAAACAAACACTAAGAAAGATCAAT11.8867924528301887No Hit
TAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGA11.8867924528301887No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA11.8867924528301887No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAAACAAAAA11.8867924528301887No Hit
ATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCA11.8867924528301887No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA11.8867924528301887No Hit
GGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGAC11.8867924528301887No Hit
GCATAAAGCATCAATGAACTGAGCAATCTATCAAAAGGATAGAACTCTAA11.8867924528301887No Hit
CAAAAAACAAATTAGCCTAATCCCCGAATCCAACAAAGCACCATTCTATA11.8867924528301887No Hit
CAATAATAAAAAAATAAAAAAATTACAATTAAAATCAAAAATAAAACCAA11.8867924528301887No Hit
GGCTCCCCACTCAGAAGCGAGCCCAATGAGGGACTAGATCAAACGACCCT11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)