FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA26.25No Hit
GTTGAACCAAGATGCATTAAGCAAAACCCAGGGATCATTAATCAGGCACT13.125No Hit
GCAGCAGGCAGATCAGGCCTAGGGGGAAGCAGGCTCCCTGGCTGTCTCTT13.125No Hit
GGTCCTTGTTTGGACAGTATGGATAGCAAATAGAAGCATTGCCACAACTA13.125No Hit
CAGATGCAGCGATTCAAGTGATCCTCTCGTCATTGCAGCAAATATCATTG13.125No Hit
TGATACAAATAAGCCCAGTCACTGACTAGATACCAAAACAATGAGAAATT13.125No Hit
AGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTG13.125No Hit
CTATGGAGGATCTCCAGTATAAGGGAATGTGGTGCTTATGGCATTTTGCG13.125No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA13.125No Hit
CACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAT13.125No Hit
GAATGGAATGGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTAGC13.125No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG13.125No Hit
AGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAAACGAAAA13.125No Hit
CTATTATCTTTTGCCTAGGAATGAGAATGAACCAGTCTCGTGACATTCTG13.125No Hit
CTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAA13.125No Hit
GTCTGTTCCTGTTCCATGGCTGTATGGAGGCTGTCTCTTATACACATCTC13.125No Hit
AGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACT13.125No Hit
TTAATGATCCCTGGGTTTTGCTTAATGCATCTTGGTTCAACTCCTTCCTC13.125No Hit
GAATGGGAGAACTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAG13.125No Hit
GAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAACTGTCTCTTAT13.125No Hit
TTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGCTGTCTCTTAT13.125No Hit
GGAAACAGTCTACCTGAAAGCTTGACATGGTGTTGGAGTCCATTATGTCT13.125No Hit
TATTTAAACAAATCGACACTAATTGAAGGCCATCCTAATACATTTGTTCG13.125No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCCTGTCTCTTATAC13.125No Hit
GCATGGCACCTATAATGTTCTCAAACAAAATGGCAAGACTAGGGAAAGGG13.125No Hit
AAAAAATAAAGAAAGAAATCTAACATCAATTAAGAAAAACTTTAACAAAT13.125No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTCTGTCTCT13.125No Hit
CCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC13.125No Hit
GAATGGAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA13.125No Hit
GGCAACACCCTTGGCCTCGATATCGAAACAGACACTCTTTTTGGGAAACA13.125No Hit
AGGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGGGAAAC13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)