FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCAGGAGACCTTAAGGAACGAGACAGCAGAAATGAACGTGTCACCAGG12.3255813953488373No Hit
ATAATGTTCAAAAATATTATAATGTCTCATAAAATTCTATAACTCATTTA12.3255813953488373No Hit
TTGCAATTCTCCATTATTCAATTACAACAATGCAACCAAACGACTGAAAG12.3255813953488373No Hit
CAATTCTCCAGTATTCAATTACAACAACGCAACCAAACGACTTAAAGTTC12.3255813953488373No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTCTCTCCATATT12.3255813953488373No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT12.3255813953488373No Hit
AAATTACAACAAGGCAACCAAACGACTTACATTTCTTGGAACGGATGCAG12.3255813953488373No Hit
GAATAAGAAAGGACCAACAACAAGTACACATCATTAACCTAACCCTGAAT12.3255813953488373No Hit
ATGCTGTACTTGATCCCAGAACCTAAGCCTAAGGTAGACGCTGTCTCTTA12.3255813953488373No Hit
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG12.3255813953488373No Hit
CAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTCTGTCTCTTA12.3255813953488373No Hit
TTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGC12.3255813953488373No Hit
GGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCAT12.3255813953488373No Hit
GCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTT12.3255813953488373No Hit
AGTTACATCTCAATAAAGTAGTGTTCTTTGTTTTTTAAGAATAGGTCCAC12.3255813953488373No Hit
AATTGATGGCCCTCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT12.3255813953488373No Hit
ATACATAGCCTGCTTACCCTGTCTTAAACAAGGTACATTTATGTCTGTCT12.3255813953488373No Hit
CAGTACTCGTGCATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAA12.3255813953488373No Hit
AGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTT12.3255813953488373No Hit
GACCGAGTGATGGTATCACCTCTGGCAGTAACATGTTGGAATAGTAATGT12.3255813953488373No Hit
AAATTGATACAATAAAACAAAATATACAACAAAAGTATCATTACCTCAAT12.3255813953488373No Hit
TGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAAAGGACATGATT12.3255813953488373No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATAAACCATG12.3255813953488373No Hit
AAAAAAAACAATTACGATTTAAAACTATTAGAAAACTAATAGATTAAAAA12.3255813953488373No Hit
ATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCCTGTCTC12.3255813953488373No Hit
CACTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTTCAATTCTC12.3255813953488373No Hit
AAAGAATTCGGATGGCCATCAATTAGAAGTCGAATAGTTTAAAAAAGAAC12.3255813953488373No Hit
TTTAATATTAAAAAAATAAGCTCAAACTATAAGACAATAAACTCTAGATA12.3255813953488373No Hit
AATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCT12.3255813953488373No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA12.3255813953488373No Hit
GTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAAT12.3255813953488373No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.3255813953488373No Hit
TTATGGTGCATGATTGCAATTCCGGATTGATGAGCTAGCACCTGCCCTTC12.3255813953488373No Hit
CCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTCTGTCTCTT12.3255813953488373No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA12.3255813953488373No Hit
ATGCGGCACAGATTGAAAGAGACAGAGAATAGTTTCGAACAAATAACATT12.3255813953488373No Hit
AGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTCTCTTATA12.3255813953488373No Hit
CCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGT12.3255813953488373No Hit
CTGGAGAATTGCACCTTTCGACCTGTTCGAAATAAGTTTTATATACCTTA12.3255813953488373No Hit
GAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAA12.3255813953488373No Hit
GAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATATGAGGCTGTCTCT12.3255813953488373No Hit
CATACAAGCTTAATGCTATCAAATAAATCAATAAATACATAAGATGTCAA12.3255813953488373No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT12.3255813953488373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)