FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTA24.081632653061225No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA24.081632653061225No Hit
CTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAACCATCAA12.0408163265306123No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGA12.0408163265306123No Hit
AATCTATACAAAAACATATGTAAATTTTTATTATATCCAAATTCTCAACA12.0408163265306123No Hit
GTCAGTTAAACATCTGCCTTCAGCTCAGGTCATGATCTCAGGGTTCTGGC12.0408163265306123No Hit
GTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAG12.0408163265306123No Hit
ACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATG12.0408163265306123No Hit
GGCAAGAGAAGAACCCCGCACTCAGAAAGAAGTGGATGATGGAAATGAGA12.0408163265306123No Hit
GGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATT12.0408163265306123No Hit
CTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGA12.0408163265306123No Hit
TTGTTTTGTTTTGAGGCTCGTGTCATCATATTCCTTAATTTGTGGTACAC12.0408163265306123No Hit
GTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCC12.0408163265306123No Hit
GGAAGGGAGAGGGGTGAGGGAATGGGGTAACTGGATGATGGACATCAAGG12.0408163265306123No Hit
CCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCT12.0408163265306123No Hit
ATGTTACGGCCAGATGTGATACCATCACTCGGTCTGATCCCTGTCTCTAA12.0408163265306123No Hit
GCTTCCCCCTAGGCCTGATCTGCCTGCTGCTCCCCCTGCTTTCCTGTCTC12.0408163265306123No Hit
CTCCTACACTGAACGTTGGACAACATGCCAACCACAAGGTTTCTTGCCAT12.0408163265306123No Hit
TCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTATTCTC12.0408163265306123No Hit
CATGATTCCAGAGAGGAATGAACAAGTACAAACCCTCTGGAGCAAAACAA12.0408163265306123No Hit
GGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTAT12.0408163265306123No Hit
TTGAAAGATTGCTCAGTACATTGATGCTTAATGCTGGGCCATATAATTCT12.0408163265306123No Hit
CGTATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCCATTACAAC12.0408163265306123No Hit
CACTAAGTAATTATAATAAAAACAAAAAGTCAATAAAGAAACAAAAAAAA12.0408163265306123No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGATATTGCCCAGCAT12.0408163265306123No Hit
GAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACACTCTGT12.0408163265306123No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA12.0408163265306123No Hit
GTCCTGAGAGGATTTCTCATTTTGGGCAAATAAGACAAGAGATATGGCCC12.0408163265306123No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGAAGTCTCATTTTTGGAAAAGAATA12.0408163265306123No Hit
GTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATCTGTC12.0408163265306123No Hit
CACAAAGATCAGCCCCACCTCTGGTTCTGCAAAGGACACTAAACCTAAGG12.0408163265306123No Hit
CAGCAGACAAGAGAATAATATGGCCCAGCATTAAGCATCAATGAACTGGG12.0408163265306123No Hit
GTATGCTAGAGTCCCGTTTACGTTTCAGTACCAACACTACGTCCCCATGC12.0408163265306123No Hit
ACATAATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACA12.0408163265306123No Hit
ATTACAACCATAATCCACATCATTAACCATCAATGAAATGAGCATGTCAC12.0408163265306123No Hit
TCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACA12.0408163265306123No Hit
AAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGT12.0408163265306123No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC12.0408163265306123No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGCTGT12.0408163265306123No Hit
ATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTC12.0408163265306123No Hit
TATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGT12.0408163265306123No Hit
TGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTG12.0408163265306123No Hit
ACCATAATAAAAAAATTCCAAAAGCGCAATAATACAACTTAAACAAACGA12.0408163265306123No Hit
CAACCATGCAGAATAAAAGACAGACTACTACAGGAGATAGAAGAAAAGAA12.0408163265306123No Hit
CTGTGGACCATATGGCCATAATAAAAAATTAAACATCATGAAGGAAAGAG12.0408163265306123No Hit
TCCTCACACATGCACTGAAGTAGTTGTGGCAATGCTACTATTTGCTATCC12.0408163265306123No Hit
ATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGTACATTAT12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)