FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAATTGGGATTAATTGTTCTATGAAGACAACCTGACAAACAACCCAA13.0303030303030303No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT13.0303030303030303No Hit
CGGATGACGGTGACTCTTTGATTCCAGGCAACCGGAAGTTTTCATGAGCC13.0303030303030303No Hit
TAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGC13.0303030303030303No Hit
CACAAACATAACTCTTAATTATGACAGAGAAAATTGGGTCTTTCTCATAT13.0303030303030303No Hit
AAATAAAACACTAGACTGCTGTAATTGTGCAACTCATAGCCGTCAACAAA13.0303030303030303No Hit
TCTCTGGAAAGGGTCAAGCCAAGCCTGGGCCTATGGGAGCCTTTCTCAGT13.0303030303030303No Hit
AACTCAAGGAGTTTGATGGGAAGAGTCTAGTCTCTGTTACCAAGGAGGGC13.0303030303030303No Hit
AAAACAACAACACCAAGGACAAAACACATCAACATACACAACTCCCTCTC13.0303030303030303No Hit
TTATACTTCCAGGAACAGGAAGCATATCAGTGTTCCACGTCTAATTTTTA13.0303030303030303No Hit
CTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAA13.0303030303030303No Hit
CTCCTACCCCGCCCTGCACTCCTCACGGCGGCGACCGCTCTGGAAAACCC13.0303030303030303No Hit
ATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTT13.0303030303030303No Hit
ATATGCCATTGTATGTATACACCATGTTTTGTTTATCCATTCATCATCAG13.0303030303030303No Hit
AGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTA13.0303030303030303No Hit
GGAAGAGGCAACACCCTTGGCCTCGATATCGAAACAGCCACTCTTGTTGG13.0303030303030303No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG13.0303030303030303No Hit
GAGCAAAAGCAGGAGAGATTAGAGTCAGACATGAGGAAGAACCCGTGGCT13.0303030303030303No Hit
GCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTT13.0303030303030303No Hit
CCATCACTCGGTCTGATCCAGCATAGTTTGTATTGCTCCAGAGGGTTTGC13.0303030303030303No Hit
ATTATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA13.0303030303030303No Hit
ATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGA13.0303030303030303No Hit
GAACAGGATACACCATGGACACAGTAAACAGAACACACCAATAGCAGTTC13.0303030303030303No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA13.0303030303030303No Hit
TTTTTAAACAATTCGACACTAATTGATGGCCATCCGAATTCTTTTGGTCG13.0303030303030303No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT13.0303030303030303No Hit
GTTTTTGTAACTGGCAGGTTTGGCATGAAATCTCATCCAAGTATCTTAGG13.0303030303030303No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC13.0303030303030303No Hit
GCTTAATGCTGGGCCATATTATTCTATTGTATGCAGTAATTGGGTATCTC13.0303030303030303No Hit
GAGCAAAAGCAGGTACCATTATATTTCCAGGAACAGGAAGCATATCAGTG13.0303030303030303No Hit
ATATAAAACTCATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCA13.0303030303030303No Hit
ATATAACTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCC13.0303030303030303No Hit
CTCTGGGGTGAAGGAAGGCTTCCTGGCCAAAGCTGGGCTGGGAACAGAGA13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)