FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCCATACACTTTGCCGTAGTGCTATCAAGCACCAAAATCTTTTCATGC13.8461538461538463No Hit
TATTTAAAGCGACGATAAATACATTTGAAAAAAAGACGATCAGTAATCCA13.8461538461538463No Hit
GTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGA13.8461538461538463No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTAAGGCCAGAGGTGA13.8461538461538463No Hit
CACTAAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGAC13.8461538461538463No Hit
GACAAGACCAATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGT13.8461538461538463No Hit
GCTAAAAAACAATGCCAAGGAAATTGGAAACGGCTGCTTTGAATTTTACC13.8461538461538463No Hit
CTCCTCAGTGAAAGCCCTTAGTAGTATCAAGCTCTCTAAACGGTTAAAGA13.8461538461538463No Hit
GAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTTCCAGGACATACT13.8461538461538463No Hit
GTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGC13.8461538461538463No Hit
CTAGTAGTTCTGCTATATACATTTGCAACCGCAAATGCAGACACATTATG13.8461538461538463No Hit
CCTCCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAA13.8461538461538463No Hit
AATGACGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCGCTTC13.8461538461538463No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGAATAGAGACC13.8461538461538463No Hit
GTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCAC13.8461538461538463No Hit
GGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGATGCCCCATTC13.8461538461538463No Hit
GAAAGGTAGCGCGAACGAGGTACAGATGCAATTGTCATACTAAGTGTCTA13.8461538461538463No Hit
TACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACA13.8461538461538463No Hit
ATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAG13.8461538461538463No Hit
GTAGGTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTT13.8461538461538463No Hit
CACTTGAATCGCTGCATCTGCACACCCATTCGCTTCTGGTAGGCCTGCAA13.8461538461538463No Hit
GTTCTTCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTC13.8461538461538463No Hit
AAGAAGTCCTCGTGCTATGGGGCATTCACCATCCATCTACTAGTGCTGAC13.8461538461538463No Hit
ATTCAATATGGAGAGAATAAAAGAAATTACAGATCTAATTTCGCACTCCA13.8461538461538463No Hit
AAACATCCATAAATAAAAAGTCAAACATAAATTGAATAATAAAAACACCA13.8461538461538463No Hit
CTCTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAG13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)