FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCACTGCACAAAGACATGCAGCTATGGGAATGAGCAGACTGTAATACA14.0No Hit
TCAATGAACTGATCAATCTTGCAAAAGGATAGAACGCTAATGTGCTAATT14.0No Hit
GATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGC14.0No Hit
GCCCAAAGCAGTGCTCGATCCCAGGACCCGGGGTCATGACCTGAGCTGAA14.0No Hit
CAAATAAGGTTTCCATGCTAAAGGATCCTCACGTTAGTGTAAGGAACCTA14.0No Hit
GGACTACGACATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGCTGT14.0No Hit
GGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCAT14.0No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCTGTCTCTTATACA14.0No Hit
GAGAGGAATGAACAAGGACAAACCCTCGGGAGCAAAACAAACGATGCTGG14.0No Hit
GAATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG14.0No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA14.0No Hit
GGTTAGCTGTTCCCTGTGGCAGCGCGGTGGGTCACCACCACATCATGCCC14.0No Hit
CAATTATACCTAACCACAGACTGGAATTTCCTTAATAAAATTCATTGTTG14.0No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC14.0No Hit
AAATGCATAGAATAAAAGAAATGAGAGATCTAATGACGCAGTACCGCACT14.0No Hit
CACAAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAC14.0No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC14.0No Hit
CAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCA14.0No Hit
GTAAAACACATACTTTAAAAAAAAAATAGTACATAAACAGAAACTATACA14.0No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA14.0No Hit
GGTAGATATTATTCCAAATCAAAAGACAACTGCACACTATCAAAATAAAA14.0No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC14.0No Hit
TTTACGGCCAGAGGTGATACCATCACTCGGTCAGATCCAGCATCGTTTGT14.0No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT14.0No Hit
CATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAA14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)