FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAGATGGTACATGCAATGAGAACTATTGGGACTCATCCTAGCTCCAG23.9215686274509802No Hit
GTACTAGAGATAGCCATGATTAGTTTGGTTCAGATAAACTGGGTTCCTGT11.9607843137254901No Hit
TGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCA11.9607843137254901No Hit
ACACATACGAATAAGACACAAACTCCATATTTCACAACATCAAAATTATA11.9607843137254901No Hit
GAGCTCGAAGACTCCCCGCCCCTGGAAGGACAAATCTTCTGGCTTTGCAC11.9607843137254901No Hit
ATCCTAGGACCCTGGGATCATGACCTGAGCCGAAGGCAGACACTTAACAG11.9607843137254901No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT11.9607843137254901No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTAC11.9607843137254901No Hit
GATTACTACTAAAATAATATTAATTCACCAAACTTAATCAACACAGTCTA11.9607843137254901No Hit
GTGTCTTTTCAGTAAATAACACAGATATAGAGTCAATCATTCAATTTATA11.9607843137254901No Hit
GATGAGTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTA11.9607843137254901No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTGCCATCATCCCTG11.9607843137254901No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGGTAATGTGCTAATTGGGCA11.9607843137254901No Hit
CTCCTTTCCCTCACTCCCCTTTTCCCTCCTTCTGAACTCAGTTTGGTGTG11.9607843137254901No Hit
AATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCC11.9607843137254901No Hit
GAAATAGATGGGGTAAAGCTGGAATCAACAAGGATTTACCAGATTTTGGC11.9607843137254901No Hit
GTGGAATGGATCTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAAT11.9607843137254901No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA11.9607843137254901No Hit
GTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGCTGTCTCTTATA11.9607843137254901No Hit
ACGTAGAAAATCAAATGAAACTAAAACTGTACTATAAAATAATTACTCTC11.9607843137254901No Hit
AAAACCATGACTCATCACTGCCACAGGATCGAGACAGTCAAAAAGCAAAT11.9607843137254901No Hit
TTACCAAGACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT11.9607843137254901No Hit
GTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAGG11.9607843137254901No Hit
ATCTTGGAGACACTCATGAGCAAACCGCACATCAGAGGAATTAAAAGATG11.9607843137254901No Hit
GCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACT11.9607843137254901No Hit
AGGGAACGAGAGAATCTCAAGCAGGCTCCCTGCTGAATGTGGAGCCCAAG11.9607843137254901No Hit
GACTTACAATGCCGAACTGTTGGTTCTATTGGAAAATGAAAGAACTTTGG11.9607843137254901No Hit
GTTTGAAAAGAGGGCCTTCTACGGAAGGAGTGCCTGAGTCCATGAGGGAA11.9607843137254901No Hit
GTCCTAATTAAGAGTTATGTTTGTGAATGGGCCAAAATAATTGATAATGG11.9607843137254901No Hit
CCTCATAAGACTTTCCTGGAAGAGAAGGTAATGGTGAAATTACTCCAACT11.9607843137254901No Hit
CCCTAGAAACAAAATAAAACAAATCTCCAAAAAATGAACATAAAACAAAA11.9607843137254901No Hit
GCGAAAGCAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTC11.9607843137254901No Hit
CAAAATAACTAAATCATCTAAGAGAACGTAATGAAAAAAATAATCCAAAA11.9607843137254901No Hit
AAATGAACGTGTCACCAGGCGGTCTGTGATTAATTGCCAAATCAATGGCT11.9607843137254901No Hit
CGCCTGGTCCAATCGCACGCAAAGAGGGCCGAGTATCGTTTGCCTAGGCA11.9607843137254901No Hit
ATCCTTGTTGATTCCAGCTTTACCCCATCTATTTCTTCTCTGTTTAATTT11.9607843137254901No Hit
CCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCA11.9607843137254901No Hit
AGGCTATGTCACGGAGCCTACGCCCCTCATCTCGCTTCATCTCTTCACAC11.9607843137254901No Hit
CCCCTGCTCTCTACACTTCAAATATATCATCTATAAGAATAACGTGCTGT11.9607843137254901No Hit
CTACATTTCCAACAAAGCCTGTTCACAACGACCATCAATCTTATACAAAT11.9607843137254901No Hit
GTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAG11.9607843137254901No Hit
CTCCTACACCTGGGGCTCTTTGCTCAGCAGGGAGCCTGCCTCTGTCTCTT11.9607843137254901No Hit
TAATAATACAAATGATTCAAGAGATGACATAACAAGGACAAAACATAACC11.9607843137254901No Hit
CACGCAAAGAGGTCCTATTATCTTTTGCCTAGGCATGATCATGAACCAGT11.9607843137254901No Hit
GAGATATCCCAAACAATTAAGAATAAAAAAAGACAAACAACAAGAAAAAT11.9607843137254901No Hit
GGTTATGAACACTGGGTCCTGGGATCGAGCCCTATGTCAGGCCTGTCTCT11.9607843137254901No Hit
CAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCA11.9607843137254901No Hit
TTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGCGACGATAAATAC11.9607843137254901No Hit
TCCCAGGACCCCGGGATCATGACCTGAGCTGAAGGCAGATGCTTAACCTG11.9607843137254901No Hit
GTCTTCCTTGCACTTGGTGTTGGAGAGTAAAAGGGTATTTCTTCAGATCA11.9607843137254901No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)