FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGAATGACAATTGCATCTGTACCTACTTCGCGCTACCTTTCTGACACTG13.0303030303030303No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAA13.0303030303030303No Hit
GAATAGAACCGAGTCCAGAAATCAACCCCCACACTGTCTCTTAAACACAA13.0303030303030303No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATC13.0303030303030303No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT13.0303030303030303No Hit
AATATATTGAATCATCACAATTAATATATAATCGTAAAAAAAAGCAAATA13.0303030303030303No Hit
ATACAGTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTA13.0303030303030303No Hit
CCTACATCTTGAACATAAGTCAATGAACCTGCATCCTAAAAAATAAATAT13.0303030303030303No Hit
CTCTTAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTGCTGTCTCT13.0303030303030303No Hit
TGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAAC13.0303030303030303No Hit
GCAAAAGGATATTCCAAATCAAACAATCAAGATGAAACATATACATCTTA13.0303030303030303No Hit
CTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAA13.0303030303030303No Hit
GTAAATCTACAGTCTATCTTGGGCTAGAGATAGAACTGTCTCTTATACAC13.0303030303030303No Hit
TCAATCAACTCAGCAATCATCCAAAATCACACAACGCAAATCACCTAATA13.0303030303030303No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGT13.0303030303030303No Hit
CATAATCCAGCTGGATAAGAAGGTTATCAGCCAAATTGCAATGAATGATG13.0303030303030303No Hit
TCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTACTGTC13.0303030303030303No Hit
CATTGGCTTATTACAACATGGCCAACGGCGCCATCATCCACCTGGCCCTG13.0303030303030303No Hit
CACACGAACTCCCCAGAAAATCACAAATACAAAATGAAACATAAAAACAT13.0303030303030303No Hit
GACCAGCACCTGTCCGTTCTGTTTCCATTCAGTATTATCATGCTTGTTGG13.0303030303030303No Hit
GCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCTAATCCCCTGCTTT13.0303030303030303No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC13.0303030303030303No Hit
CAGTCATTAAGCAGCAGCCATTGGCTCAGGTCATGATCCTGGGGTCCTGG13.0303030303030303No Hit
GAGTGGGCCTGCACTGAGGAAGAAGGCAGAAGACGGAGACTGTCTCTTAT13.0303030303030303No Hit
TACCTGAAGAGCACACAGAATGCCATTGACGAGATTACTAACATGTATAT13.0303030303030303No Hit
GTCCCGGGATCGAGCCCCGCATCGGGATCTCTGCTCCTGTCTCTTATACA13.0303030303030303No Hit
GTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGACCTGACAGCAA13.0303030303030303No Hit
CTTGTGCCATAAGTATGCTGCTTTAAATCCTGGCTGGTTCAGTCCTTAAG13.0303030303030303No Hit
ACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACA13.0303030303030303No Hit
GCTAGATTCCAGGACCCTGGGATCAAGACCAGACCTTAAGTCAGACACTT13.0303030303030303No Hit
GCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAG13.0303030303030303No Hit
GGGTAATGAACTGTACTTGTTGTTGGCCCATTCCTATTCCACCATGTTAC13.0303030303030303No Hit
TCAAAAAAGTCCAAAAACAAATTAACACAATACATCACCACTCACACATA13.0303030303030303No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)