FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_E10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG23.278688524590164No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG23.278688524590164No Hit
GCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTATCTC11.639344262295082No Hit
GATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGC11.639344262295082No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGCCA11.639344262295082No Hit
CCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTC11.639344262295082No Hit
CTATTCGACAACTAATAGATGTCCATCCGAATACTATTGTTCTCTGTCTG11.639344262295082No Hit
TACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTT11.639344262295082No Hit
CCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATCT11.639344262295082No Hit
CTTCCTGATAAATCACATTTACATGACTCCTCCTCTCGGGGTCTGCTTCT11.639344262295082No Hit
GTACAGGGATGGCCAGAGGCAGACAAGATGGGCTGGGACTGAGGCACCAT11.639344262295082No Hit
GATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGCTGTCTCTT11.639344262295082No Hit
ATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTT11.639344262295082No Hit
GCCTACTAAAGCTAAAAGGGGTTAGTTAATTCACTTGCTACACATTCCAC11.639344262295082No Hit
CCATACGGCCAGAATAAAAAAGTACACATCAGGAATCAAAGATAAGAACC11.639344262295082No Hit
GCTGTCCTGAGAGCAATTCTCATTTTGGGCAAAGAAGACAATAGATATGG11.639344262295082No Hit
AATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTA11.639344262295082No Hit
GTACACATCAGGAAGGCAAGAGAAGAAACCCGCACTCAGAATGAAGTGGA11.639344262295082No Hit
ACATTGACAAACCAACTTATAATTCCTAATTAAAAGAAAAAGCCACAAAA11.639344262295082No Hit
GTGGATGATGGCAATGAGAAACCCAAATACAGCATACAAGAGAATAAAAT11.639344262295082No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT11.639344262295082No Hit
CCTTCAGCTCAGGTCATGATCCCGGGGTCCTGGGATGGAGGCTGTCTCTT11.639344262295082No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTAACAAAACTACGTCCCCTTTC11.639344262295082No Hit
GCACACCATCGTCCCTGTGTCCTCAGAGGAAGGCTGTGTCTGACAGCCGG11.639344262295082No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTGTTTGATTATGGACATATGTT11.639344262295082No Hit
GTCAGTAAGTATGCTAGAGTCCCGTATTCGTTTCATTGCCATCATCCACT11.639344262295082No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA11.639344262295082No Hit
GGATGCTAGAGTCCCGTTTTCGTTTCATTGACATAATCCACTTCATTAAG11.639344262295082No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA11.639344262295082No Hit
CCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGA11.639344262295082No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT11.639344262295082No Hit
AAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACCTGTCTC11.639344262295082No Hit
GGAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTCATAATT11.639344262295082No Hit
TCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGA11.639344262295082No Hit
GTAGCAGAGATGCATGGAGAAGGTAGAGAATTTCAAGCTTTCAGAGATGC11.639344262295082No Hit
CAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG11.639344262295082No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT11.639344262295082No Hit
TGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATT11.639344262295082No Hit
CCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAA11.639344262295082No Hit
GGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGC11.639344262295082No Hit
CATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCA11.639344262295082No Hit
ACATCCTGGAGGAACGGGCAATCAGATGCCGTCTGCCTCCAGGATGTGGC11.639344262295082No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATTAGA11.639344262295082No Hit
GCCCAAAATTAGAAATCCTCTCAGGACAGCAGACTAAACACCAGATGTGC11.639344262295082No Hit
AGCTGAGCCACCCAGGCACCCTCAGGACTGAAAACTTAGCAAATCTCTCA11.639344262295082No Hit
GTCCTTAACATGACATAAAAAGGTACGGCATGATTTGGCCTCAAACCCTG11.639344262295082No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGCTGTCTCTTATAC11.639344262295082No Hit
AAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAAT11.639344262295082No Hit
GAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAG11.639344262295082No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG11.639344262295082No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG11.639344262295082No Hit
CATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAA11.639344262295082No Hit
TGCCAGGGAAAGGTTTGTTCTGTGCTTCTCTCCAAGCTTCTGGTAGCCAC11.639344262295082No Hit
GAGATATGTCCCAGCATTAAGCATCAAAGAACTGATCAATCTTGCAAAAG11.639344262295082No Hit
AGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGACTGTCTCTTATA11.639344262295082No Hit
GTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATGAAGGCAC11.639344262295082No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG11.639344262295082No Hit
TCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATAT11.639344262295082No Hit
AAAATTGCCAATCAAATTGCCATAATCCACTACATACTGAGTGAGCGGTT11.639344262295082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)