FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT12.941176470588235No Hit
ACGAATTACAGAAAATACAAAAGAATCAAGATAAAACAAAAAACATACAC12.941176470588235No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGCTGTC12.941176470588235No Hit
AAAAAAATTAAATCAAATCACTGATATACACAAATAAACAAAAAAAAATA12.941176470588235No Hit
GTAAACAAGACTCCACCAAACATTTCCATACAAAAACAACTTCAGTCAAT12.941176470588235No Hit
CAAAAAATTAACTTAGAAAACATGAAAAACAACATAACACATATAAACTA12.941176470588235No Hit
CCCTTATACTCTAGATACACAAAACATAAATTGAACATTAACACCATAAA12.941176470588235No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.941176470588235No Hit
GAAAAAAAAAAATTATAAAACAAATAGAAACAAATACGAATACATAAGTA12.941176470588235No Hit
AACAAAATCAAAAAAAACAAATCAACACGTCAACATAACAAAACCAAACT12.941176470588235No Hit
AGCTATACCAGGGACTCCTGAGTGGATGTCAGGGACACGTCCTGTCTCTT12.941176470588235No Hit
ATCAAATAACAATAATCCACTTCATTATTATTGAACAGATCATCTCATTC12.941176470588235No Hit
CTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTTT12.941176470588235No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCC12.941176470588235No Hit
AACTAATGATGAAAATAAATAATCTCAATTACAGAATAAACATCATAAAA12.941176470588235No Hit
AACCATGACAGGGACCAATCCAAACATTGGCCCACTCACAGTAAGCCGGC12.941176470588235No Hit
AGATTGAGCACTTAATTGAACCAAAATGCATTAACAAAAAAAACTCTATC12.941176470588235No Hit
GTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATT12.941176470588235No Hit
AATCAATCCAATAAAATAAAATTAACTCCTTTACTTGCCTACTTTAAATT12.941176470588235No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.941176470588235No Hit
TTGTACCCTTAGGCACCTGGGTGGCTCAGTCGGTTAAGCACCTGCTTTCC12.941176470588235No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.941176470588235No Hit
CAGAATGAATAGGATGAAGTCAAAGAAATACACAATTACAGCAAACAAGA12.941176470588235No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA12.941176470588235No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA12.941176470588235No Hit
AAAAAACACCCACTTATGTTATAACCACATGAAATAACAACCTTGAATAA12.941176470588235No Hit
ATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAG12.941176470588235No Hit
AAAAAAGAAAAATAACATAATATAATATTAAACCATTGCAAAATAAATAT12.941176470588235No Hit
CATTTTAGATGTATTGAATTGTTCTCTAAAATAGCTATACCAGGGACTCC12.941176470588235No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.941176470588235No Hit
ATTCTAAATATGCAATACTAAACTAAAAAATAAAAAAAATTAAAACAAAA12.941176470588235No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT12.941176470588235No Hit
CATCAATAATATATCGAAAAATGTCAAATATAACTTGAACTACAAAACCA12.941176470588235No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)