FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCC13.7037037037037033No Hit
GAATAAAGCATCAATGAACTGACCAATATTGCAAACGGACAGAACGCTAA13.7037037037037033No Hit
TCATTGTTCAGGCACTTAGGGACAACCTGGAACCTGGAACCTTCGATCTT13.7037037037037033No Hit
CAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG13.7037037037037033No Hit
CCCTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTT13.7037037037037033No Hit
CTCCAACACCATGTCAAGCATTCAGGTAGACTGTTTCCTTTGGCATATAC13.7037037037037033No Hit
ACATTAGATCTCTCAGTTCTTTTATTCTCTCCATATCTGTCTCTTATACA13.7037037037037033No Hit
AAAAATAACTATATACTCGAATAGAACGTAAAAAAGAAATTTCAAAAAAA13.7037037037037033No Hit
GGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCAT13.7037037037037033No Hit
TGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCTGTCTCTT13.7037037037037033No Hit
CTTATCTCTTGTTCTACTTCAAGCAGTAGTTGTACTGTCTCTTATACACA13.7037037037037033No Hit
CTGAGAAGTTAATTGATGAATTGGCAAAATTCTACAATGTGATCCCCCAA13.7037037037037033No Hit
GATAAAAAAAAAAAAACAGAAATAAAATCCAATAAACGACCTAACCATTA13.7037037037037033No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC13.7037037037037033No Hit
TTCAGTAAGTATAATAGATACCCGTATTCGTAAAAATACAAACACTAAGA13.7037037037037033No Hit
CTCCTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAG13.7037037037037033No Hit
GGCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCC13.7037037037037033No Hit
ACTAACTACAGCAAATCACCATCAACAAGTAAAACCATTCAATCACTACC13.7037037037037033No Hit
CCCCAACTGCATTTTTGACATCCTCATAAGTATGTCCTGGAAGAGAAGGT13.7037037037037033No Hit
GAACAACATGGATAGAGCAGTTAAACTATACAAGAAGCTCAAAAGAGAAA13.7037037037037033No Hit
TGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGG13.7037037037037033No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT13.7037037037037033No Hit
TTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAA13.7037037037037033No Hit
TGGTACATCTGTTCATCCTCAAGAATTCCCCTTTGGCTTGTGTTGAGAAT13.7037037037037033No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTAT13.7037037037037033No Hit
GAAATGAAAAGTGGCGAGAGCAATTGGGACAGAAATTTGAGGAAATAAGG13.7037037037037033No Hit
AAGCCAACTAGCTACAGATTAAATACTCATAATAATTCTCTATTACAATT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)