FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCACTG26.896551724137931No Hit
CAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCCTGTCTCTTA13.4482758620689653No Hit
ATCTAAAATCTGCCTAGTCTGATTAGCAACATCCAAGGCATCCGCTGCCA13.4482758620689653No Hit
ATCATGGCCTGGACAGTGGTGAAAAGTATGTGTAACACAACAGGGGTAAA13.4482758620689653No Hit
ATCAATAACATCACAAATACTAAAAAAAACACAATGTATATAAAAATATA13.4482758620689653No Hit
CTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGG13.4482758620689653No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC13.4482758620689653No Hit
GCTCAGTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCT13.4482758620689653No Hit
GTGGTATATATACACAATGGAATACTATGCAGCCATCAAAAGAAATGAAA13.4482758620689653No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC13.4482758620689653No Hit
GTAGTGTTGGTAATGAAAAGAAAACGGCACTCAATCATCTGTCTAATATA13.4482758620689653No Hit
TATAATAATTAAAAAAACAAAAAACCAACAAAACAAAATCAAACTTAAAC13.4482758620689653No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTG13.4482758620689653No Hit
CCATTGAAGAACTCAGACGGCAAAAATAATGAATTTAACTCTGTCTCTTA13.4482758620689653No Hit
ATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGACTGTCTCT13.4482758620689653No Hit
AGCGAAAGCAGGTCAATTATATTCAATATGGAGAGAATAAAAGAATTCGG13.4482758620689653No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG13.4482758620689653No Hit
GAAAACGGGACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGA13.4482758620689653No Hit
AATAAGTTCCTTAAGGTCATGGTTTTAGTTTTCCACGCTGTATAATACTG13.4482758620689653No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA13.4482758620689653No Hit
ATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTGTCTCTTAT13.4482758620689653No Hit
GAAACAAGGTCGTTTTTAAACTATTCGACAACTAGTTGACTGTCTCTTAT13.4482758620689653No Hit
AACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGACTGGCTGTCAGT13.4482758620689653No Hit
GTTCCCTAATACTCATGCTGTCTTCAACCAAACTTCCAAAATTTTAACAA13.4482758620689653No Hit
CAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGA13.4482758620689653No Hit
GGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCTCTTGT13.4482758620689653No Hit
GAAAAAAAACAAAAACAACTACACAAAATAAAAATACGGAAACAAACAAA13.4482758620689653No Hit
GGTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)