FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTTGCCTTGTTGTAATTGAATACTGGAGAATTGCACCTTTCGACCTTC13.571428571428571No Hit
CTACTTCAAAAATAACAAATACCAAATAAGAAAAAACAATAATATTAAAC13.571428571428571No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA13.571428571428571No Hit
GGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATT13.571428571428571No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT13.571428571428571No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT13.571428571428571No Hit
GGAGGGAGGCCTGAAGGGCAGAAACTCGGGGACAACTTTCTCTGCGGAGT13.571428571428571No Hit
ACATTTCATGAGATCAAAAATCATAATCCGCAAACAATCAAAGAGATAAT13.571428571428571No Hit
GTGTAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAG13.571428571428571No Hit
CCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAG13.571428571428571No Hit
CATGACCCTCGAGTAAATGTCACGAGACTGGTTAATGCTCATGACTAGGC13.571428571428571No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC13.571428571428571No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT13.571428571428571No Hit
ATAATCAATAATGAACAAAATTCTAATCTCATATCAAAAATCCAATAAAA13.571428571428571No Hit
CAATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCT13.571428571428571No Hit
ATCAATGCAAATCAAAAAAACCAGTCTACACATCGAGTATCGACTAATCA13.571428571428571No Hit
GCACTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTG13.571428571428571No Hit
CGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGTTGCTTAATGCTGGT13.571428571428571No Hit
AATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAAT13.571428571428571No Hit
CAAAAATACAAATGAAAAAAATATCACAAAAATCAAAAATAAAACATCAC13.571428571428571No Hit
ACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCA13.571428571428571No Hit
ATACTGCAGCTTCTGTTTCCCTGCAGGCATACCCGTGGCTTCGTGAATCT13.571428571428571No Hit
CTAATTTTTTTATCCACATTCATATTCCAACATCATACATAAAATTAAAC13.571428571428571No Hit
CATACACAAAAAACAAATCAATAAGATTTCGCAATGCTACTATTTCCTAA13.571428571428571No Hit
ATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCT13.571428571428571No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA13.571428571428571No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC13.571428571428571No Hit
GTCCATAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTC13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)