FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAACTATAAATTATAAACAACCAAAAACCAAACATCAACATTAGAAAT12.631578947368421No Hit
TAGCAACAGAATAAAAACAAATATACACAACCAAAGAAACAACCAAATAA12.631578947368421No Hit
ATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC12.631578947368421No Hit
TGGTACGTCTGTTCATCCTCAAGAATTCCCCTTTGGCTTGTACCAGTCTC12.631578947368421No Hit
ATAAAAAACTACACAACAGGAAGGCAATACAAGAAACACTAAAAAATAAA12.631578947368421No Hit
AAAAATAGATCCAACAATGACACATTAAAAACAACAAACAAAAAATCATA12.631578947368421No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT12.631578947368421No Hit
ATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCC12.631578947368421No Hit
GCATTGCTTCTCATTGTTCAGGCACTTAGGGACAACCTGGAACCTGGAAC12.631578947368421No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.631578947368421No Hit
GAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGT12.631578947368421No Hit
AAACTATACAATAAGCTCAAAAGAGAAATAAAGTACCATGGGTCCAACGA12.631578947368421No Hit
GGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGC12.631578947368421No Hit
ATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAG12.631578947368421No Hit
GTCTTAAATCAGAACCCGAGGGGCCAGGATGGCTCACGGTGGTGTCCGCA12.631578947368421No Hit
AGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTC12.631578947368421No Hit
GGCTTGTGTTGAGAATAGAACGATTCCTCATGGGAATCCAGGAAAGTGTA12.631578947368421No Hit
CAAAAAAAATAACACCTACACAAAAATAACAACAATATACAGTTAAAAAC12.631578947368421No Hit
GCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCAT12.631578947368421No Hit
TCTCTTGTCTTCTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATT12.631578947368421No Hit
CAAAAAAGCCAAGCAACACGAAAACGATACAAAAACAACACAGAAAAAAC12.631578947368421No Hit
TACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTT12.631578947368421No Hit
CAATTATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCG12.631578947368421No Hit
AAAAAAGTGTATCAATTAAAAAACATACACAAAAAAACAATAAAATATAA12.631578947368421No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.631578947368421No Hit
AACAATAAAAAATAATAAAACAACATACAAATAATGCCAAACAATAAAAA12.631578947368421No Hit
CGCGAGATACTCACTAAGACCACTGTGTAAAATATGGACATAATCAAAAA12.631578947368421No Hit
ATCATAAAATGAAACAAAAACGAAGACTTTGTAATAAAAATCTAAAATAA12.631578947368421No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.631578947368421No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.631578947368421No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.631578947368421No Hit
AACAAGGGCTGGAGAATAGAACCGAGTCCAGAAATCAACCCACACACTGT12.631578947368421No Hit
GTCTCTGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTCTGTCTCTTATAC12.631578947368421No Hit
ACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGATGTGTACTTT12.631578947368421No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA12.631578947368421No Hit
AAATAATATATACAACCATAAAGCAAAAATTAACTAATCAATAAATAAAA12.631578947368421No Hit
CAAAAACAAAAATAAATGTCTCTAAAATTTTAAATATAAAAATTAAAATC12.631578947368421No Hit
TACTAATGATTATAAATCAAAAGAAAAACCTAATCTAAAACATTCTCATA12.631578947368421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)