FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCATGTATAATCAATTCACCCTCCAGAATCACAAGTAGATAGTTAAACG12.941176470588235No Hit
CATCAAATCAATTTCCAATATTAAACTCAAAAATATAATAGGTGTTAGAT12.941176470588235No Hit
ATCCAGGTAAGACAATGACAGGAGCTGAAGTAAGTTCAAAGGCTACTGTA12.941176470588235No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA12.941176470588235No Hit
CTAATTGATGGCCATCCGAAATCTTTTGGTAGCTGTCAGGCTGTCAGTAA12.941176470588235No Hit
AAGTGGATGATGGCAATGAGATACCCAAATACAGCAGACAATAGCTCTCT12.941176470588235No Hit
TTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATC12.941176470588235No Hit
GATGATGGCAATGAGATACCCAATTACACCATAAAACAGAATAATATTGC12.941176470588235No Hit
TTCTTAGGGCCCGTGTGGAAAATCCGCTGGCGGTCCTTGTGTGGGTTGAT12.941176470588235No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA12.941176470588235No Hit
CTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGC12.941176470588235No Hit
ATTATGAATAGAAACATAGTTTTTATACATAATCAAACCTCTCTTGAAAC12.941176470588235No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCT12.941176470588235No Hit
GAGCAATCTTGCAAAAGGAGAGAACGCTAATGCTGTCTCTTATACACATC12.941176470588235No Hit
ACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCT12.941176470588235No Hit
GGGGGGCTCAGTCGGTGAAGCGGCTGCCTTCAGCTCAGGTCATGACCCCG12.941176470588235No Hit
CTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGACTG12.941176470588235No Hit
GTGAGGGAGGGTTGGAGGGAGACAGAGACTCTTAAGCAGGCTCAACGAGC12.941176470588235No Hit
GAGTGATGGTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCA12.941176470588235No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC12.941176470588235No Hit
ACATTAGATCTCTCAGTTCTTTTATTCTCTCCATATTGAATCTGTCTCTT12.941176470588235No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA12.941176470588235No Hit
ATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCTCCAGTATTCA12.941176470588235No Hit
GAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCA12.941176470588235No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCT12.941176470588235No Hit
ACAGGAGATTGTACCCATGAAAAAGGAGCAGTCAGACATCAGGAAAGACT12.941176470588235No Hit
ATATTCAAAAATCTAACATAAATATATGAAAAAAACAACAGGAATGAAAC12.941176470588235No Hit
TAGTTATTGTCATTGGCGTCTCGTCATCATCTGGGAATTCAGCCTGTCTC12.941176470588235No Hit
ATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACTTCAT12.941176470588235No Hit
ATTAGTAGAAACAAGGAGGCTTGAATTCCCATGCTTAGATATAGAAGCTA12.941176470588235No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA12.941176470588235No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT12.941176470588235No Hit
GTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTT12.941176470588235No Hit
GATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTGTATCTTATAC12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)