FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCCTGTCTCTTA110.0No Hit
CTGTTAGCACGGTGGAATAGTAGGGCTTTATTAACTAGACTGTGTGCTAA110.0No Hit
CACACAGACACACAGACACACACACACAGACACAGACACACACACACACA110.0No Hit
GTGTTAGAAGATGGTAATACAAGAGAAAGCGCAAATGGAAACAAAAGGAA110.0No Hit
ATCATGGAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAA110.0No Hit
GGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACT110.0No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC110.0No Hit
ACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATC110.0No Hit
TAATTAGGACAGAGAAAATTGGGTTGTTTGTCAGGTTTTCTTCATAGAAC110.0No Hit
AAGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGG110.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)