FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_D10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAAAAATAACAAAAAGTAAACAAATCCTAAAACGAATCTATAAAACTA12.857142857142857No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAACTGTCTC12.857142857142857No Hit
ATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC12.857142857142857No Hit
GAGGGTTTGTCATTGTTCATTCCTCTATGGAATCAAGTCAATTCTTCTCT12.857142857142857No Hit
ATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGAT12.857142857142857No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTAC12.857142857142857No Hit
GATTGAGGTTATAATACCTTCAATTACTGATTTAAAATTTAAGACAATCC12.857142857142857No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCCTG12.857142857142857No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC12.857142857142857No Hit
AGTCAAAGGCGGTCTTGAATAAGTGGAAGGCTTCTGCCAGATTATCTAAC12.857142857142857No Hit
GGTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGC12.857142857142857No Hit
TAATAATGCATTTCAATAATAATCTCTAGAAAGATGTAAAAATTTAACTA12.857142857142857No Hit
ATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGGACTCGTT12.857142857142857No Hit
GTATCACCTCTGGCCGTAACATGGTGGAATAGGAATGGCCCAACAACAAG12.857142857142857No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACAC12.857142857142857No Hit
GGAAAGAGAAGTACCCCCCACACATAATGAAGAGCAAGAACTCAATGAGA12.857142857142857No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGG12.857142857142857No Hit
GAAGGGGAAGCAGGCTCCCCACTGAGGAGAGAGCCCAATGTGGGGATCGA12.857142857142857No Hit
CTCTAGCATACATACTGACAGCCAGACAGCGACCAAAAGAAATCGGATGG12.857142857142857No Hit
TTCATGATGTGTACTTTTTGATTATGGCCATAACTACCACATTCTGTCTC12.857142857142857No Hit
CTATAAGGCTGAATGAATATCACCATGGCTTCTGTGCATTGAAAAGACCC12.857142857142857No Hit
GGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTA12.857142857142857No Hit
TTCATGAAAAAAATAATAATAATCTGAAAACAATACAATACATATCAACC12.857142857142857No Hit
GAACTTGTCTTGGGGAATATCTCAAACCTTTCAAATGATGACACTGAGCT12.857142857142857No Hit
ATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGC12.857142857142857No Hit
TCTCAGGACAGCAGACTCCACCCCAGTTGTGCCTTCATCTGGATCGGTCT12.857142857142857No Hit
GAGAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCA12.857142857142857No Hit
AAAAGCAAGATTACAGATTACGTTTAATTACAAAAACAACAAACCCATAA12.857142857142857No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.857142857142857No Hit
ACTAACTATGCTATATAACCTTTTTAGTTTCAAAAACAACAATAATAAAA12.857142857142857No Hit
CAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAA12.857142857142857No Hit
GCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTA12.857142857142857No Hit
ATGCTAAAAGCCCAATTTGACAAACAAAAAGAAATTAAAAAAAATCAACA12.857142857142857No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG12.857142857142857No Hit
CAAAGACGGCAGCAATAAACTAAACAGGAGCAGGAAAGCCATTGTATACA12.857142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)