FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA22.73972602739726No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA22.73972602739726No Hit
ATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCA11.36986301369863No Hit
AACAAGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGA11.36986301369863No Hit
ACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCACTGTC11.36986301369863No Hit
CAGCACGAATACAATCTAAGAAACCCTCAATAAGAATTAACTACAACTAC11.36986301369863No Hit
AGTAGAAACAAGGTCATGGAATCATAATAATGGGAAGAAGGTGTCCATTC11.36986301369863No Hit
CTTATTCTAATGAAATCAACATGTTTAATTTAAAAAAATATACAAAAATG11.36986301369863No Hit
AAACAAGGGATGAGATCAAGACTTTGTCTATCACCTGTCTCTTATACACA11.36986301369863No Hit
TTGCTATTCCACCATGTTACGGCCAGAGGTTATAAAATCACTAGGTCTGA11.36986301369863No Hit
GGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTAC11.36986301369863No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGCCA11.36986301369863No Hit
CAACAGGTGTGTACAACTGATCTGAGGCCAGTCATACCCTCTCCTGCTAA11.36986301369863No Hit
CACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTT11.36986301369863No Hit
TTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA11.36986301369863No Hit
ATACTCACTAAGACCACTGTCTGTCTCTTATACACATCTCCGAGCCCACG11.36986301369863No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA11.36986301369863No Hit
GCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCATTCCTCTCTGG11.36986301369863No Hit
ATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAGTTCTT11.36986301369863No Hit
GCCAACCCGTGGCCCACGCAGAGGAAGCCGGGGCAATAAGCTTCCCTGGA11.36986301369863No Hit
TCAATGAACTGAGCAATCTTGCAAAAGTAGAGAACGCTAACTGTCTCTTA11.36986301369863No Hit
GAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCCTG11.36986301369863No Hit
GGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGG11.36986301369863No Hit
CAATACTTAAGTAAAAAAAATAATTATCCCCAAAATCTACAAAGATGACA11.36986301369863No Hit
ATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACC11.36986301369863No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATCTGTCTCTT11.36986301369863No Hit
GTCCTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA11.36986301369863No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC11.36986301369863No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT11.36986301369863No Hit
GTGCGGGACTGCGACATTAGATCTCTCAGTTCTTTTATTCCTGTCTCTTA11.36986301369863No Hit
TCATTGGATTGAAGCATTGTCGCACAAAGTCTTCCATTTTGGATCAGTAC11.36986301369863No Hit
AATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA11.36986301369863No Hit
CCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCTC11.36986301369863No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA11.36986301369863No Hit
GTATGCTATAGTACCGTTTTCGTTTCATTAACAACACTACGTACACTTGC11.36986301369863No Hit
CAAAAAAAAATTGCCTAAATTATTAAAAAAAAAAGATTATTTCCAAAAAT11.36986301369863No Hit
CTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCCTGTCTCTTA11.36986301369863No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA11.36986301369863No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT11.36986301369863No Hit
GACCACTGTGGACCATATGGCCCAGCATTAAGCATCAATGAACTGAGCAA11.36986301369863No Hit
GTTGTCACTGGATTTTTACATCAGGTGATTATTGTTCTTTCTCCCCAAAG11.36986301369863No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATCTG11.36986301369863No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA11.36986301369863No Hit
TCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCC11.36986301369863No Hit
ACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCA11.36986301369863No Hit
GGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCG11.36986301369863No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC11.36986301369863No Hit
CCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGT11.36986301369863No Hit
CCACCGTGAGCCATCCTGGCCCCTCGGGTTCTGATTTAAGACCAGGTTCC11.36986301369863No Hit
AGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGA11.36986301369863No Hit
GGACCATATGGCCATAATCAAAAATTAAACATAATGAATGCAAGAGAAGA11.36986301369863No Hit
AGAAGAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAAGAGGCA11.36986301369863No Hit
CATTATCATCAAGGATTCCAACTCATTGGCTTATTACAACATGGCCAACG11.36986301369863No Hit
CACTAAGGCCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG11.36986301369863No Hit
AATAAACACATAACCATTCTCTAATAATGCAAGATTACTCACTTCATTGA11.36986301369863No Hit
TCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGCTGTCTCT11.36986301369863No Hit
CACCAGCACTGTCCTCACGGTCTCCTAGTGAAGAGGGAGGCATTCATATT11.36986301369863No Hit
AAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAAT11.36986301369863No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCCTG11.36986301369863No Hit
GGCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGC11.36986301369863No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA11.36986301369863No Hit
AATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAAT11.36986301369863No Hit
GGACACGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAA11.36986301369863No Hit
GTCAATAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACCTGTCTC11.36986301369863No Hit
TAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACAGC11.36986301369863No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTGGTC11.36986301369863No Hit
CCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAATT11.36986301369863No Hit
GATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTG11.36986301369863No Hit
CTTCAAAAATTTTAATAAAAGAAAATAAAAATTGACTCTAGCAAAAAAAA11.36986301369863No Hit
AAACATTAAAGTAATAACAAATACCAAAATTACAAAAAACATTGAAAATA11.36986301369863No Hit
GAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCCAA11.36986301369863No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)