FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C7_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C7_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGTGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAG15.555555555555555No Hit
GGATTGAGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAAAGTC15.555555555555555No Hit
CTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAGACAGATGGCT15.555555555555555No Hit
ACATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCCTGTCTCTTATA15.555555555555555No Hit
CTTTAACCGATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGG15.555555555555555No Hit
CCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGAGGAATG15.555555555555555No Hit
GTCCACTATTCTCTTGTCTGCTGTAATTGGGTATCTCCTGTCTCTTATAC15.555555555555555No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTGTCTCTTATA15.555555555555555No Hit
TTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATCTTCATGATCTCAG15.555555555555555No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGCTGTCTC15.555555555555555No Hit
CAAAAACAAAAACACAAACACAAACACAAAAACACAAAAAAACATAAAAA15.555555555555555No Hit
GGTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGCT15.555555555555555No Hit
GGACACCAAACTACAAATAATCAATCATACAAAATTCAAACCAAAATTTA15.555555555555555No Hit
GAGATACCCAAATACACCAGACAAGAGAATAATGGACATGAATACAGAGA15.555555555555555No Hit
TGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGCTGTCTCTTA15.555555555555555No Hit
GCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGCTGTCT15.555555555555555No Hit
GTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCC15.555555555555555No Hit
TAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCT15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)