FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGA23.508771929824561No Hit
GAATGAAGTTCATGATGGCAATGATAAACCCAATAAAAGAAGACACTTTC11.7543859649122806No Hit
TTCCAAGAACTGTAAGTCGTTTGGTTGCCTTGTTGTAATTGAATACTGGA11.7543859649122806No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCTGTCTCTTATAC11.7543859649122806No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG11.7543859649122806No Hit
GCATTAAGCATCAATGAGCTGAGCAATCTTGCAAAAGGAGAGAACGCTAA11.7543859649122806No Hit
GTAATTGAATACTGGAGAATTGCACCTTTCGACCTTTTCGAAATAAGTTT11.7543859649122806No Hit
ATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACTCTGTCT11.7543859649122806No Hit
AAACAAACGATGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTA11.7543859649122806No Hit
GACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACCTGTCTC11.7543859649122806No Hit
TGGCTTACTTGCTAATGAGTAATATACCCTTGTTTCTGTCTCTTATACAC11.7543859649122806No Hit
AATCACAACATACTTATAATTTAGTAAATCCAAAATTCTACACAGAGACA11.7543859649122806No Hit
ACATAGAAATCGTCTGCTTTTCTTTTGCCAGGCAATGGCTTTTAAAGTTA11.7543859649122806No Hit
GTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCC11.7543859649122806No Hit
ACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTGCAATTCT11.7543859649122806No Hit
ATCAAGCATACAGTCAATAGCTACATACGCTCTATAACAAATCATTACAA11.7543859649122806No Hit
CAGTAAGTATGCTAGAGTCCCGTGTTCGTGTCATTACCAACACGACGTCC11.7543859649122806No Hit
CCCGGGACCCGGGGTCATGACCTGAGCTGAAGGCAGCCGCTTCACCCTGT11.7543859649122806No Hit
CTTCAATAAGTAGTACTAGGGAAAATGGACAGCCACATACAAGAGAGTGA11.7543859649122806No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCACTGTCTCTT11.7543859649122806No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACATCCTGTCTCT11.7543859649122806No Hit
GTACAAATCAGGAAGGCAAGATAATAACAACGCACACAGAATTAAGACTG11.7543859649122806No Hit
ACTGAGCACCTACTCTCTGCCAGGCACTGTTCTAGGTGCTGAAATTAAAG11.7543859649122806No Hit
GTTCATTGATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAAT11.7543859649122806No Hit
CAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA11.7543859649122806No Hit
CAAAAGAATTCAAACCAAATACAAGCATTCACACAACAAATACAGTTAAA11.7543859649122806No Hit
GGAATAGGAATGGCCCAACAACAAGTACAGTTCATTACCCTAAGGTATAT11.7543859649122806No Hit
GAAGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCT11.7543859649122806No Hit
TCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATCTGGCCAT11.7543859649122806No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCACTATAATTCGTTCGCAAAA11.7543859649122806No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT11.7543859649122806No Hit
ATAGGAATGGCCCAACAAAAAGAACATATCAATACACAAAGATCTGTCTA11.7543859649122806No Hit
ATGCTGAGGTAAGTCTTGATTGCCAATATTTCACATTTCAAACACTGTCT11.7543859649122806No Hit
AGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTACTGTCT11.7543859649122806No Hit
GTCTTCTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTG11.7543859649122806No Hit
TATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCACT11.7543859649122806No Hit
ATATGGTCCACAGTGGTCTTAGTGAGTATCTAGCGAGTGCGGGACTGCTA11.7543859649122806No Hit
ACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTA11.7543859649122806No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGTTTGTCCTTGTTCAT11.7543859649122806No Hit
ATATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC11.7543859649122806No Hit
CCTACTCTCTGCCAGGCACTGTTCTAGGTGCTGAAATTAAAGGTCATATT11.7543859649122806No Hit
CAACAAGTACAGTTCATTACCCTAAGGTATATAAAACCTGTCTCTTATAC11.7543859649122806No Hit
CAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGA11.7543859649122806No Hit
CATTGGATTAGGGCCCACCCAATGACCTCATTTTAACTTAATTACCTCTT11.7543859649122806No Hit
ATTATATTCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCAATAGC11.7543859649122806No Hit
GGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAGAG11.7543859649122806No Hit
CCTTAGAGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCTG11.7543859649122806No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC11.7543859649122806No Hit
TACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACA11.7543859649122806No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA11.7543859649122806No Hit
GTTACATATGTGTCTTGCTCTGACATTTCAAGTCCTATTTTTAACAGGAT11.7543859649122806No Hit
GTTAAATAAACCTTAGTGAAATGAAATCTAAGTTTTGTTCTGACAAAAAA11.7543859649122806No Hit
CAGGGGGAGTGGGGAGAGGGAGAAGCAGGCTTCCCACTGAGCCTGTCTCT11.7543859649122806No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTCCAGAGGGGTTGGCCTTGTTCAT11.7543859649122806No Hit
CAATGAAGTGTATGATTGAAAATAGATAACAAATAACATCACAAAAAATA11.7543859649122806No Hit
GGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAAT11.7543859649122806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)