FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA36.666666666666667No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCC12.2222222222222223No Hit
GGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTAC12.2222222222222223No Hit
AGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTA12.2222222222222223No Hit
GGCAAGAGAAGAACCCATCACTCAGAATGAAGTGGATGATGGCAAAGAGA12.2222222222222223No Hit
CATTACATATATATAATATAGCAAGATAGCTCATTACAAATACTATCTCT12.2222222222222223No Hit
GTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTT12.2222222222222223No Hit
AATTTATTCACTCCATATAGAATAACATTGACAACATAAAGCTATGTCTA12.2222222222222223No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGCTGTCTCT12.2222222222222223No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATAACAGCATACAAGAGA12.2222222222222223No Hit
GATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGCTGT12.2222222222222223No Hit
GGAGTAATGGGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGG12.2222222222222223No Hit
GGCCAACTATATTCAATATGGAGAGAATAAAAGAATTCGGATGGCCATCA12.2222222222222223No Hit
TCATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCA12.2222222222222223No Hit
ACTGTATTTTGAGCAAAATAACAAAGAAAATATGACATATCAAAACTTAT12.2222222222222223No Hit
GTCTGGCTGTCAGTAAGTATGCTAGAGTAACGTTTTCGTTTCATTACCAA12.2222222222222223No Hit
CTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGC12.2222222222222223No Hit
ATAAACAAATAAATACTAAAATATAGATTCAAAGCATGCAATAAATATAC12.2222222222222223No Hit
ATATTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCTGTCTCTTAT12.2222222222222223No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCCTG12.2222222222222223No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAA12.2222222222222223No Hit
CCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACATGCAACCTTT12.2222222222222223No Hit
GCGTCCCGGTTTCGTTTCATTACCATCACTCGGTCTCATCCAGCATCGTT12.2222222222222223No Hit
CAGGGAAACAGAAGCTGCAGTATGAGGGCATTTTCATCAAGGATTCCAAC12.2222222222222223No Hit
AACCTCTGGAGCAAAACAAACGATTCTGGATAAGACCGAGTGATTGTATC12.2222222222222223No Hit
CTAGCATACTTACAGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC12.2222222222222223No Hit
CATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCCTGT12.2222222222222223No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT12.2222222222222223No Hit
ATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATTGGGCAAGGGGACGTA12.2222222222222223No Hit
ATACTCACTAAGACCACTGTGGACCATATGGCCTGTCTCTTATACACATC12.2222222222222223No Hit
CAACAAGTACAGTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAG12.2222222222222223No Hit
ATAATGCCATAAACAAAAATTACACAAAACCAAGTCAAGAGAAAAAAATC12.2222222222222223No Hit
AATAAAAACAAACACAAAAAAAATCAATATCTACATAATAAAATTACACA12.2222222222222223No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA12.2222222222222223No Hit
CAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGACG12.2222222222222223No Hit
GCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAG12.2222222222222223No Hit
GGGTAATGAACTGTAATTGTTGTTGGGCCATTCCTATTCCACCATGTTAC12.2222222222222223No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.2222222222222223No Hit
GGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTCCTGTC12.2222222222222223No Hit
CTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAAT12.2222222222222223No Hit
GAAGACAAGAGATATGGCCCAGCATTAAGCAGCAATGAACTCATCAATAT12.2222222222222223No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA12.2222222222222223No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG12.2222222222222223No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)