FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACTCTGT12.631578947368421No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGT12.631578947368421No Hit
TTCTCATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCCTG12.631578947368421No Hit
GGTCCACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATT12.631578947368421No Hit
ACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTTTTCTAAAAT12.631578947368421No Hit
ATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGATCTCTCAGT12.631578947368421No Hit
ATTAGTGGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATGCTGTGA12.631578947368421No Hit
AGAAATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG12.631578947368421No Hit
GTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGGTTGCCTT12.631578947368421No Hit
GACATGACCCTCGAGGAAATGTCACGAGACTGGTTCTGTCTCTTATACAC12.631578947368421No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTCTG12.631578947368421No Hit
GGTGAAATTTCTCCAACTATTGCTCCCTCCTCAGTGAAAGCCCTTAGTAG12.631578947368421No Hit
CCACACTAGCAAACTAAAATACATCAACACACAAACCAAAAGAAATAATA12.631578947368421No Hit
GGAGACCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATT12.631578947368421No Hit
TGCCTCTTCCTTTTAAGGACTTTTGATCTCGGCGGCTGTCTCTTATACAC12.631578947368421No Hit
TTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAATTCTTTTATTC12.631578947368421No Hit
GCATCCAAGAGTACTACTACTGTGTCCTCTTGGTAGCTAAAATAATCTGC12.631578947368421No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGTTAA12.631578947368421No Hit
ATTCCTCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGT12.631578947368421No Hit
CTGTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCA12.631578947368421No Hit
AGCTTAGAGAACCTACAAAATGAACATGCACACTATGGAATCTGTCTCTT12.631578947368421No Hit
GCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTT12.631578947368421No Hit
CCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTCCTGAT12.631578947368421No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA12.631578947368421No Hit
GCCAGAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCT12.631578947368421No Hit
GCAAAAGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTC12.631578947368421No Hit
GTATGCTAGAGTCCCGTTTTCTTTTCATTACCAACACGACGTCCCCTTTC12.631578947368421No Hit
CCTGTGACTCGCACAAGTTGTCTCCCTTCTCTGGAGGTGATTTCCCCTGC12.631578947368421No Hit
ACCTTCACTACCTCCAGAGCAGAAATGAAAAGTGGCGAGAGCAATTGGGA12.631578947368421No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC12.631578947368421No Hit
GTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCAG12.631578947368421No Hit
CTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCC12.631578947368421No Hit
TGCCAAAGGAAACAGTCTACCTGAAAGCTTGACATGGTGTTGGAGTCCAT12.631578947368421No Hit
CAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTGAAAGAGGAA12.631578947368421No Hit
GGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCGATCATGGAAAAG12.631578947368421No Hit
TTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTT12.631578947368421No Hit
GTTGTACCATAATGCCTGCAAAATTGTACTCTGGATAAATATACCATGCA12.631578947368421No Hit
GAGTGGCTGTTTCGATATCGAGGCCAAGGGTGTTGCCTCTTCCTTTTAAG12.631578947368421No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)