FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAAACATGTATCAATATGAATTTCCCAACAACAATTAAAGATCAAAAC12.0408163265306123No Hit
GTTCCAGGTTGTCCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGAT12.0408163265306123No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC12.0408163265306123No Hit
GCAGGGAGAGCAGCAGGCAGGAGGAGAAGCAGGGTCCCCACTGAGCAAGG12.0408163265306123No Hit
GACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGC12.0408163265306123No Hit
CATTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATCAATG12.0408163265306123No Hit
GAGCAAAAGCAGGTCAATTATATTCAATATTGAGAGAATAAAAGAACTGA12.0408163265306123No Hit
CTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGTGTATCTCA12.0408163265306123No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCCTGTCTCTTAT12.0408163265306123No Hit
GTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCTGTCTCTTA12.0408163265306123No Hit
CTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGG12.0408163265306123No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC12.0408163265306123No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.0408163265306123No Hit
ATATAAATCACATCATATAATAAAAAATCTGAACATTTAACAAATACACA12.0408163265306123No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.0408163265306123No Hit
GTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATCATT12.0408163265306123No Hit
GACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGA12.0408163265306123No Hit
GGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACACTGTCTCTTAT12.0408163265306123No Hit
GAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTACCTACTTCGCG12.0408163265306123No Hit
CTGGAAGAGAAGGTAATGGGGAAATTTCTCCAACTATTGCTCCCTCCTCA12.0408163265306123No Hit
TTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCC12.0408163265306123No Hit
GAGAATAATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCA12.0408163265306123No Hit
CCATGGTAAAATGAACTGAACCGAACCTCCACTCATTAACGACCTATCAA12.0408163265306123No Hit
ATATGGAGAGAATAAAAGAATTCGGATGTCAATAAATTAGCTGTCTCTTA12.0408163265306123No Hit
AACTCACGCTGAGTTAAAATGGCACAGTCTTTCAAAAGAGATGTATTGTC12.0408163265306123No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCT12.0408163265306123No Hit
CAACATCCCATTGCCCAATTAGCACATTAGCGTTCTCAACTTTTGCAAGA12.0408163265306123No Hit
TGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGC12.0408163265306123No Hit
GCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGACATTT12.0408163265306123No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT12.0408163265306123No Hit
CTTATAAACAATAATAAAACTAAAAGATACCCATACCAATACTATAAAAC12.0408163265306123No Hit
ATAGAGGCAATGAAACTAAAGAAAATGGTGGAATAAATTTGGTGCCAAAT12.0408163265306123No Hit
CGATTGGACCAGGCGATCATGGAAAAGAACATAGTACTGAAAGCTGTCTC12.0408163265306123No Hit
ACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGA12.0408163265306123No Hit
CTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAA12.0408163265306123No Hit
TCTGTATATTTTCAGAGACTCGAACCGTGTTACCACTGTCTCTTATACAC12.0408163265306123No Hit
CAATGAGATACCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCATT12.0408163265306123No Hit
ACATAAAACCCAAAAAAAAGAAAAAATGAACATACCAAAATAGAAAAAAA12.0408163265306123No Hit
AAATGGAAGACTTTGTGCGACAATGCTTCAATCCAATGATCGTCGAGCTT12.0408163265306123No Hit
CCGATGAGGACCCCAACTGCATTTATGACATACTCATAAGTATGTCCGGT12.0408163265306123No Hit
GGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGAC12.0408163265306123No Hit
TCCGAAAATCGAAACTAACAAGTTTGCTGCAATATGCACACATTTGGAAG12.0408163265306123No Hit
GATGGGCATCATCCCAGTTTCCTGTCTTGAACTGGTTAGCTGGGAACTCC12.0408163265306123No Hit
TTCTAAGTGTCTCGCTGGATTCCTCTTTCAAGATCCATTCCACGATTTGT12.0408163265306123No Hit
TACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAAT12.0408163265306123No Hit
GCTTAAACATGGTTCATAGGTTTCTAGGACACATAATAGCGCCTGTCTCT12.0408163265306123No Hit
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAAC12.0408163265306123No Hit
TGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTC12.0408163265306123No Hit
GCTTATGGCATTTTGCGCTGGAATTAGGAAAAGTAGAGTCGGATTGACAT12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)