FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C2_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C2_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTAGCTAAATAAACTAAAACAAGAATCAACAATACATTTATCATAAAC111.11111111111111No Hit
AGAGATATGGACCAGCATTAAGCATCAATGAAAAGAGAAAACTTTCAAAA111.11111111111111No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC111.11111111111111No Hit
GATGCTTAATGCTGGGCCATATTATTCTCTTGTCTGCTGTAATTGGGTAT111.11111111111111No Hit
CCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCATATTA111.11111111111111No Hit
GAAATAATTTAATTATGCCAATGAAAAACAAAATTAAAACATACAAAATA111.11111111111111No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAA111.11111111111111No Hit
ATCTGGCCATTATCAAAAAGTACACATAATGAAGACAATATAAGAACCCA111.11111111111111No Hit
GTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAC111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)