FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAA27.4074074074074066No Hit
GTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATTGC13.7037037037037033No Hit
ATGGAACAGGAACAGGATACACCATGCAATCTATTCGAGAAATTTTTCCC13.7037037037037033No Hit
AATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCAC13.7037037037037033No Hit
GATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACA13.7037037037037033No Hit
AAGTATGCTAGAGTCCCGTTTTTCGTTTCATTACCAACACTACGTCCCCT13.7037037037037033No Hit
TATTATCATACAGTAATTTGCCACATGGTTACCTTTGCTTATTCTGTCCT13.7037037037037033No Hit
AGAATAATGGACATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTT13.7037037037037033No Hit
TAGCGGAAGAGAGATAAAAATAAAACAAAATGAAACCAGGGAGGGAGATA13.7037037037037033No Hit
GAAGAACCCCGCACTCAGAATGGCCCAGCATTAAGCATCAATGAACTGAG13.7037037037037033No Hit
AAACAAACGATGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTA13.7037037037037033No Hit
GCAGTTCATATAACCCGATTGATGGACCACTACCTGAGGATAATGAACCA13.7037037037037033No Hit
GCCAGACAGCGACCAAAAGAATTCGGATGGCCATCAATTAGTTCTGTCTC13.7037037037037033No Hit
GTGGAGGCCATGGTGTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGA13.7037037037037033No Hit
CATTAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG13.7037037037037033No Hit
CACTAATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCCTGTCTC13.7037037037037033No Hit
ATACTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCAC13.7037037037037033No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA13.7037037037037033No Hit
CTGTTTGTGCATACCCACTTGGTTCATTATCCTCAGGTAGTGGTCCATCA13.7037037037037033No Hit
GGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACT13.7037037037037033No Hit
CTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTG13.7037037037037033No Hit
GTCGAAAGGTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACG13.7037037037037033No Hit
CTTCAGGAGATTGATGAAAAGTAAAATGAGCGACACCTGGGTGACTCAGC13.7037037037037033No Hit
CATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATG13.7037037037037033No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG13.7037037037037033No Hit
GTTCCCATCCTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGT13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)