FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C1_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C1_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCAACCCGATGGGGTCTTTCATGTCTGTCTCCTTTGGGGCCTCCATC111.11111111111111No Hit
GAAGACAAATAAGATATAATAAAATCATAACAAAAATAAATCAAAAAACA111.11111111111111No Hit
GTTCTTCTCTTGCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGT111.11111111111111No Hit
TACAAGAATAAATAACAAAAATCGGTAAAATCAATCAAATATACAAATCA111.11111111111111No Hit
CAAAAATGACACAAAAAAAAAAATCAAAGAACTAATCACTCATTCACACA111.11111111111111No Hit
AACATAATCAATATAAAAATAAATTCCAAAATGTCTAAATCTTCAAAACA111.11111111111111No Hit
TGCTTAACGACTGAGCCACACAGGCTCACCTTAATTGAAATATATACTTG111.11111111111111No Hit
TGCTGGATCAGACCGAGTGATGGTATCAACTCTCGCCGTAACATGGTGGA111.11111111111111No Hit
AATAAATGATGTAAATACTAAAAATTTAGGAAGCTGTATATATCACACTA111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)