FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAA24.0No Hit
GAGCATGACCTGAGATGAAGGCAGACGCTTATCCAACCTGTCTCTTATAC24.0No Hit
CCCCAGGCAGCAGGGAGCCTGCTTCTCTCTCTGCCTGGAGCATCCCCCTG12.0No Hit
GAGAGGCAGGCAGAGGGAGAAACAGGCTTCCTGCGGAGCCTGTCTCTTAT12.0No Hit
GACCAGGTCTCTGTCATCAAGGTGAAGATTCACGAAGCCACGGGTATGCC12.0No Hit
GCAATGAGATACCCAATTACAGCAGACAAGAGAATAATATGGCCCAGCAT12.0No Hit
GCTCATGCTCAGTCTCCCTCTCTCTCAAATAAATGGATACATCTTTAAAA12.0No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCTGTCTCTTA12.0No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA12.0No Hit
CTGTAATTGGGTATCTCATTGCCATCATCCACTTCATTCTGAGTGCGGGG12.0No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGG12.0No Hit
TTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGC12.0No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT12.0No Hit
GAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGG12.0No Hit
CAGGTGCTCTGGGGGAGATCTGTTTTAAAAGCAAATATGACCTTTAATTT12.0No Hit
GTCCTATTCCACCATGTTACGGCCAGAGGTGATACCATCACTCGGTCTGA12.0No Hit
CTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGCAGACTC12.0No Hit
GTGTTTCTGTTGGCTTCTTTTCCTCCATGTTCTGTTAAGTGACAGCTGTC12.0No Hit
GCCATATGGTCCACAGTGGTCTTAGTGAGTATCTCGCGCTGTCTCTTATA12.0No Hit
CTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGCAT12.0No Hit
CATTAGCGCTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.0No Hit
ATCATGTCCATTATTCTCTTGTCTGCTGTAATTCTGTCTCTTATACACAT12.0No Hit
CTGAATCCCCAGATGATGACGAGATGCCAATGACAATAACTAGACAGAGA12.0No Hit
AGCAAAAGCAGGGGGGTACTGGTAGGCAGTCAGCCCCATGTAACCTCTGT12.0No Hit
CTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGCTGTCTCTT12.0No Hit
GAACACCCTACTGTGTGCCGTGTGAGCACAAAGCTAACCACTGGAGGGTA12.0No Hit
ACTCTAGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATG12.0No Hit
CAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCC12.0No Hit
AAAGAGAACATATCAGGCAGAGAGAGGAATTGCCCGCTAATTTCACGGAA12.0No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.0No Hit
AGCATACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGATGGCCAT12.0No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.0No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.0No Hit
CTATTATGTGTCCTAGAAACCTATGAACCATGTTTAAGCATTTCACCCTC12.0No Hit
TCCCTTCACAGATAGTTTCTCACTCACTGAGTCCTACCAATTCTCCCTCC12.0No Hit
ACTGTGGACCATATGGTCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.0No Hit
GGCAAGAGATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGC12.0No Hit
ATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGA12.0No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCCTGTCTCTTATAC12.0No Hit
GTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACTGTCTCTTAT12.0No Hit
GACCCCGGAATCATGACCTGAGCCGAAGGCAGACGCTTAATGACCTGTCT12.0No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC12.0No Hit
ACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGATT12.0No Hit
TACTTACTGACAGCCAGACAGCGACCAAAAGAATTCGGAAGGCCATCAAT12.0No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA12.0No Hit
TGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCA12.0No Hit
TTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTCTTA12.0No Hit
CTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATAT12.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)