FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_C10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAAC25.405405405405405No Hit
TCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAATGTGCTAATT25.405405405405405No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCC12.7027027027027026No Hit
ATAATACACACACCTAATAGAAACAAAAAAAAAAAAACAACCACTATAAA12.7027027027027026No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA12.7027027027027026No Hit
ATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC12.7027027027027026No Hit
CCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATTCCACCAT12.7027027027027026No Hit
GCTTCTGTGGTCACTGTTCCCATCCTGTTGTATATGAGGCCCATGCAACT12.7027027027027026No Hit
GAAATTATCTCATTAACTAATAAAACCACAAGTTGTAAGTAATTAACAAA12.7027027027027026No Hit
GGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATCTCTCA12.7027027027027026No Hit
CTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTCCCTCCTCA12.7027027027027026No Hit
CCGGCATCGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTATTGGTGTGTT12.7027027027027026No Hit
CTCATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCT12.7027027027027026No Hit
GATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGT12.7027027027027026No Hit
GTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCA12.7027027027027026No Hit
CAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACCTGTCTCTT12.7027027027027026No Hit
GTAGAGAGCAGGGGAGTGGCAGGTCCCATTTTCGTTGTAAGAGAAGGGGA12.7027027027027026No Hit
CTCCACAGCAAGCTCATGGTCCTACATTGTGGAAACACCTAGTTCAGACA12.7027027027027026No Hit
AACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA12.7027027027027026No Hit
CCAGGGGGTTTGTCCTTGTTCATTCCTCTCTGGAATCATGTCCATTATTC12.7027027027027026No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.7027027027027026No Hit
TTTTGATGGTGATAACCGTACCATCCATCTACCATCCCTGTCCACCCCCC12.7027027027027026No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.7027027027027026No Hit
ACTCTTGTGAGCTGGGTTTTCATTTGTTCTCATCAGGCTTACCACTTGGC12.7027027027027026No Hit
CATTAGCGTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAAT12.7027027027027026No Hit
GTCTCGAATAGATTGCAGCACTTCTGGTGTCGTCCACTTTCCCTTTTCTG12.7027027027027026No Hit
CAGAAGGACAAATACTGTCCTCATGCTGATATGACTTCATAGTCAAATTT12.7027027027027026No Hit
TCTCTGGAATCATGTCCATTATTCTCTTGTCTGCTGTAATTGGGTATCTC12.7027027027027026No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG12.7027027027027026No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTGCCATCATCCACTTCATTCTG12.7027027027027026No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAA12.7027027027027026No Hit
TGCCCAATTAGCACATTAGCGTTCTCTCCTTTTGCAAGACTGCTCAGTTC12.7027027027027026No Hit
GCATTAAGCATCAATGAACTTAGCAATATTGCAAAATGATGTCTCTTATA12.7027027027027026No Hit
CCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCATGCCTAGGCAAAAG12.7027027027027026No Hit
ATATGGCCCAGCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAG12.7027027027027026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)