FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACAAAACAACACTACAACCAATCCATAGAAAAACAAAAATACACCTCTT12.2222222222222223No Hit
TAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAACGA12.2222222222222223No Hit
CAGTATAGTGACTCAGCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTC12.2222222222222223No Hit
TCTCTGTTCCCTAAATGTGTTGAAGGAATAAAAGAGTACTACTACTGTGT12.2222222222222223No Hit
CTATTCGAGAAATTTTTCCCTAGCAGTTCATATCTGTCTCTTATACACAT12.2222222222222223No Hit
ACAATTATGCAATCATTACAACTACTTCTACAAGTAGAAAAATAGATAAT12.2222222222222223No Hit
GAATAAAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGCTGTCTCT12.2222222222222223No Hit
ATAAAAACGAAGAATCAAAAGAATGAATCAAAAAAACAAAAACAACCATA12.2222222222222223No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCTTGC12.2222222222222223No Hit
CAATTAAAGAGTACCATTTTAATTACATAACAAACACTAAGACACATTTC12.2222222222222223No Hit
AGGTAAACCTCATTCATGACTAAAATATTCTAAAACAATAAATTCAATTA12.2222222222222223No Hit
GTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACCTGTCTCTT12.2222222222222223No Hit
TCCACAACTTGAGGGGTTTTCGGCTGAATCTGGGGGGCTATATGAAGCAA12.2222222222222223No Hit
ACATTAAACATCAATTAAATGAGAAAAAATCAAAAATTACCAAAATACCA12.2222222222222223No Hit
GTTCTCTCCTTTTGCAAGATTGCTCAGTTCCTGTCTCTTATACACATCTC12.2222222222222223No Hit
ATGTAGGTATGGTCCATGGTCTTCTTTTCCCTCTTTTTGTTAACTGCTGG12.2222222222222223No Hit
CTCAGAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCTGTCTC12.2222222222222223No Hit
GAGGTGATACCATCACTCGGTCTGATCCAGCATCGTTTGTTTTGCTCCAG12.2222222222222223No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA12.2222222222222223No Hit
GTTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTC12.2222222222222223No Hit
CATTGCCATCATCCACTTCATTCTGAGTGCGGGGTTCTTCTCTTGCCTTC12.2222222222222223No Hit
GGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATATGG12.2222222222222223No Hit
GAGAATATAACTATTCCTCTTTGTAATCCAGTAATATGCACAATTCTATT12.2222222222222223No Hit
CATCTGGATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGT12.2222222222222223No Hit
AAAGAATTCGGATGGCCATCAATTAGTTGTCGAATAGTTTAAAAACGACC12.2222222222222223No Hit
TGTGTGCACAAAGCATTTGCTCTAAGGCCCCATGTTCTGACCTGAATGCG12.2222222222222223No Hit
GGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCATTTTGGGCAAAGAAGA12.2222222222222223No Hit
GAGAGGGACAAGCAGGCTCCCCACTGAGTGGTGAGCCAACATGGGACTCA12.2222222222222223No Hit
TATTTATTCAGTTTGTACTTCATGGAAAACAAATCGTTTCAGTGATGGTA12.2222222222222223No Hit
GTCCTCATGCTGATATGACTTCATAGTCAAATTTATAGAGATGGAAAGTA12.2222222222222223No Hit
TCACAAAATAGATAAATCAAAAACATCATCAACAAGATAAATAATTCAAA12.2222222222222223No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA12.2222222222222223No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG12.2222222222222223No Hit
GTGCACAAAATACACAACATATCCAGCAGCCCTCATTCTGTCTCTTATAC12.2222222222222223No Hit
TGGTAATCCTTTCAGAATCAAGACAGTCTTCAAATCTGAAATCATATAGA12.2222222222222223No Hit
AAACAAGGTCGTTTTTAAACTATTCGACAACTAATTGATGGCCATCCGAA12.2222222222222223No Hit
TTCTATTACTGTGTATTTCTTGACTGGGAAATCTCATCTGGTATAACTGC12.2222222222222223No Hit
AGTCAATATGGAGAGAATAAAAGAACTGAGACTGTCTCTTATACACATCT12.2222222222222223No Hit
GTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG12.2222222222222223No Hit
GAGAAATCCTCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTG12.2222222222222223No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATCTGTCTCTTATACA12.2222222222222223No Hit
CACGCAAAGAGGGCCTATTATATTTTGCCTAGTTATGAGCATGAACAAGT12.2222222222222223No Hit
ATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTT12.2222222222222223No Hit
AGACTGAATAGGAAAACCAGAAAAGAGAACATATCAGGCAGAGAGGAAGT12.2222222222222223No Hit
GTGTTGGTAATGAAACGAAAACGGGACTCTAGCATACTTACTGACCTGTC12.2222222222222223No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)