FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGAT25.128205128205128No Hit
GCATTAAGCATCAATGAACTGAGCAATCTTGCAAAAGGAGAGAACGCTAA25.128205128205128No Hit
ACTTTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA12.564102564102564No Hit
GTAAGTATGCTAGAGTCACGTTTTCGTTTCATTACCAAAACCTGTCTCTT12.564102564102564No Hit
GTGCAATTCTCCAGTATTCAATTACAACAAGGCAACCAAACGACTTACAG12.564102564102564No Hit
CCGTAACATGGTGGAATAGGAATGGCCCAACAACAAGTACAGTTCATTCT12.564102564102564No Hit
GTTCTTCTCTTGCCTTACTGATGTGTACTTTTTGATTATGGCCATATCTG12.564102564102564No Hit
ACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATG12.564102564102564No Hit
CAGTAATCCACAATATCAGGTGCAAGATCCCAATGATATCTGTCTCTTAT12.564102564102564No Hit
AAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTATGGAT12.564102564102564No Hit
AATTGAAGAAATGCGGCACAGATTGAAAGCGACAGAGAATAGTTTCGAAC12.564102564102564No Hit
GCATGTACCATCTGCCTAGTCTGATTAGCAACCTCCATGGCCTCCGCTGC12.564102564102564No Hit
GTAGCGCGAAGTAGGTACAGATGCAATTGTCATTCTACTGTCTCTTATAC12.564102564102564No Hit
TCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAAT12.564102564102564No Hit
CCCTTTGGGTCTTATTGCTATTTCCGGCTTGAACTTCTTGCTGTATCTTG12.564102564102564No Hit
TACCAACACTACGTCCCCTTGCCAAATTAGAACATTAGCGTGCTCTCCTT12.564102564102564No Hit
TAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGA12.564102564102564No Hit
GTACTAGTCCCTGCTGCGTCAGCCTACCCTACTGCCAGAGTAGTCTCTCT12.564102564102564No Hit
GTGGAATGGATCTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAAT12.564102564102564No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTC12.564102564102564No Hit
GTGTCCATGGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCC12.564102564102564No Hit
CCTCGAGGAAATGTCACGAGACTGGCTCATGCTCATGCCTAGGCAAAAGA12.564102564102564No Hit
TTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAAT12.564102564102564No Hit
CACATGGAACGTTATTTATCTTTTGAGCTTCTTGTATAGTTTAACTGCTC12.564102564102564No Hit
TTTCATTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCGTTCT12.564102564102564No Hit
GCAGAAATGCCACTCGACTGTGTTGGTTTTCAGGGAGTGTCTGGAAATCC12.564102564102564No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC12.564102564102564No Hit
CATAATAAGTAACTACTGGAATAGAACTTAAACGACAAAATTATCAAACA12.564102564102564No Hit
GCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAG12.564102564102564No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG12.564102564102564No Hit
GAACAGATCTTCATGATCTCGGAGAACTCTTCTTTCTTGATCCTGTCTCT12.564102564102564No Hit
GATCAAAAGTCCTTAAAAGGAAGAGGCAACACCCTTGGCCTCGATCTGTC12.564102564102564No Hit
GAGTAAATGAAACAAACAAAAAAATGATATCCTCTTATTTGTATGAAAAT12.564102564102564No Hit
ACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAAC12.564102564102564No Hit
TCATTGATGCTTAATGATGTGTACTTTTTGATTATGGCCATATGGTCCAC12.564102564102564No Hit
TTATTCTCTTGTCTGCTGTAATTGGGTATCTCATTGCCATCATCCTGTCT12.564102564102564No Hit
GTGCTAATAGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAAAACGGGA12.564102564102564No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)