FastQCFastQC Report
Tue 25 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A4_new.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A4_new.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGAGAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTACC12.564102564102564No Hit
CACGCAAAGAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGT12.564102564102564No Hit
GCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTCAG12.564102564102564No Hit
CCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACA12.564102564102564No Hit
CCCTGGCATCAATACGGGCCCTAGACACCATGGACTCCACCATGCTAGAA12.564102564102564No Hit
GTGCTGTGGATGTTGACGATGGTCATTTTGTCAACATAGAGCTAGAGTAA12.564102564102564No Hit
ATGGAATGGCTAAATACAAGACCAATCTTGTCACCTCTGACTATGGGAAT12.564102564102564No Hit
TATCAAATCATCATAAGTCTGTAAAGTAACAGAATTAAAATCTGAAAAAT12.564102564102564No Hit
ATGCTGTGAATCAGCAATCTGTTCACAAGTGGCACACACTAGACCAAAAG12.564102564102564No Hit
TGCCCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGAC12.564102564102564No Hit
CTATTGGGACTCATCCTAGCTCCAGTGCTTGTCTGAAAGATGACCTTCTT12.564102564102564No Hit
GATCTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTG12.564102564102564No Hit
CTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGA12.564102564102564No Hit
CTGTGGTCACTGTTCACAACCTGTTGTATATGAGGCCCATGCAACTGGCA12.564102564102564No Hit
GGTCTTGTCTTTAGCCATTCCATGAGAGCCTCAAGATCTGTGTTCTTTCC12.564102564102564No Hit
TTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGATGATGATTATCGGGGA12.564102564102564No Hit
ACTGTGGACCATATGGACATAATCAAAATGTACACATAAGGAAGGAAAGA12.564102564102564No Hit
CTAAGAAAGAAGTGCATGATGGCAATGAGATACCCAATTACAGAAGAACA12.564102564102564No Hit
GCAAGAAGTTCAAGCCGGAAATAGCAATAAGACCCAAAGTGAGGGGTCAA12.564102564102564No Hit
CAATATTGATAGAAGAAAAGAACTGAGAGATATAATGTCGCAGACCCGCA12.564102564102564No Hit
ATATAGGAGACCGGTTGGAATTTCTAGCATGGTGGAGGCCATGGTGTCTA12.564102564102564No Hit
GTACAGATGCAATTGTCATTCTAAGTGTCTCGCTGGATTCCTCTTTCAAG12.564102564102564No Hit
AACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAG12.564102564102564No Hit
GCTCATTAGGGTTCGATATGGGCTCCTGTCTTTAATGGTTCCATTGGAAC12.564102564102564No Hit
CAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACCTGTCTCTT12.564102564102564No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT12.564102564102564No Hit
AACATGGATAGAGCAGTTAAACTATACAAGAAGCTCTGTCTCTTATACAC12.564102564102564No Hit
GTATGCTAGAGTCCCGTTTTAGTTTCATTACCAACACTACGTACCCTTGC12.564102564102564No Hit
CTTATAACTTCTGTTCGCATGTCGGATGTCCGTCCTTCATCTGTCTCTTA12.564102564102564No Hit
CAAATAACATTTATGCAAGCCTTACAACTACTGCTTGAAGTAGAACCTGT12.564102564102564No Hit
GTGCTGGCTAGCACTACGTCAAAGGATATGGAACAGATGGCTGGATAGAC12.564102564102564No Hit
TCAATTAGTTGTCGAATAGTTTAAAAACGACCTTGTTTCTACCTGTCTCT12.564102564102564No Hit
CGATAAATACATTTGAAAAAAAGACGATCAGTAATCCACAATATCAGGTG12.564102564102564No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTACACTGCTGTCTCT12.564102564102564No Hit
TTCCATGGCTGTATGGAGGATCTCCAGTATAAGGGAATGTGGTGCTTATG12.564102564102564No Hit
ACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACT12.564102564102564No Hit
GGCACACACTAGACAAAAAGCAGCTTCTCTGGTCACTTTTCCCATCCTGT12.564102564102564No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC12.564102564102564No Hit
GTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACT12.564102564102564No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)