FastQCFastQC Report
Mon 24 Feb 2025
HT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHT5K2DRX5_n01_CIVIR_Ferret_Flu_Tissue_P1_A1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGT13.125No Hit
GACCAGCACCTGTCCGTTCAGTTTCCATTCAGTCTTATCCTGCATGTTGG13.125No Hit
CTAACTGACCCACCAGGGTGGGAAAACAAAACAAAACAAAAAACAAACAA13.125No Hit
AGACAAGAGATATGGCCCAGCATTAAGCATCAATGAACCTGTCTCTTATA13.125No Hit
GAACACAAATCCTAAAATTCCCTTAGTCAGAGGTGACAAGATTGGTCTTG13.125No Hit
GCATTCTGAGAGAAAAGAAGTATGACACAACTGTGGCCCAGACTGAAAAC13.125No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA13.125No Hit
TCCTGTGGAGCAGGGGGCCCAATGTGGGACTCGATCCCAGGACCCTAGGA13.125No Hit
GTGTTGGTAATGAAACGAAAATGGGACTCTAGCATACTTACTGACAGCCA13.125No Hit
TTCCAGCTTTACCCCATCTATTTCTTCTCTGTTTAATTTTGCTTCCTCTG13.125No Hit
AGCAAAAGCAGGGAGCTGAGTTAGGAGGCAATTACAATAACCCAGGCATG13.125No Hit
ACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTC13.125No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCTGTCTCTTATACA13.125No Hit
CAACATACATGAATTACCATAAAAAAATGAAATCATTCGAAACTACATTC13.125No Hit
GTCTTCAACCAAACTTCCAAAATTTTAACAAAGGGTTTCACCCGCATAAT13.125No Hit
TTTCAGATGTGCCAATGAATTTACAAAATGCTAGTGCTGTCTCTTATACA13.125No Hit
ACAGTAGCCTTTGAACTTACTTCAGCTCCTGTAATTGTCTTACCTGGATG13.125No Hit
GCAGTTACTCAGAGCTTCTCACAGAAAGTGTACTCCTAATCCCCTGCTTT13.125No Hit
ATCCAGCCATCTGTTCCATAGCCTATTCCGTATTGCTAGCCACCACCATT13.125No Hit
TTCCCATTTAGGGCATTTTGGACAAAGCGTCTACGCTGCAGTCCTCGCTC13.125No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG13.125No Hit
AACCAAACGACTTAAAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAG13.125No Hit
CCGTGTTACCATTCCATTCAAGTCCTCCGATGAGGACCCCAACTGCATTT13.125No Hit
TAGGAATGGCCCAACAACAAGTACAGTTCATTACCTGTCTCTTATACACA13.125No Hit
TACATATGGTAAATGTTCCATTCCCAGCCAAATGATTTGTGTAATGGATG13.125No Hit
TCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATAT13.125No Hit
TTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGTGCCATATTATTCT13.125No Hit
CGTTTCATTGCCATCATCCACTTCATTCCGAGTGCGGGGTTCTTCTCTTG13.125No Hit
CCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACC13.125No Hit
GAAATGCCCTGAAAGTACGCGTAGGATGGCAATTACTCACCTAAAATTGT13.125No Hit
ACAGTGGTCTTAGTGAGTATCTCGCGAGTGCGGGACTGCGACATTAGATC13.125No Hit
ACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCTGTCTCTTATA13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)