Basic Statistics
Measure | Value |
---|---|
Filename | HNYY3DRXX_l02_n02_bc04_g149.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11974917 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GAGCGCG | 40 | 0.0 | 145.1257 | 1 |
CACCGAC | 1171785 | 0.0 | 144.93355 | 9 |
CCACCGA | 358675 | 0.0 | 144.92953 | 8 |
ACACCGA | 283215 | 0.0 | 144.92766 | 8 |
TCACCGA | 331930 | 0.0 | 144.90248 | 8 |
GCCACCG | 77965 | 0.0 | 144.78035 | 7 |
CCCACCG | 98040 | 0.0 | 144.77237 | 7 |
AGCACCG | 46420 | 0.0 | 144.75996 | 7 |
TACACCG | 83525 | 0.0 | 144.75986 | 7 |
GACACCG | 51275 | 0.0 | 144.6973 | 7 |
CTCACCG | 87600 | 0.0 | 144.67972 | 7 |
TGCACCG | 58520 | 0.0 | 144.67212 | 7 |
GTCACCG | 64895 | 0.0 | 144.6479 | 7 |
TTCACCG | 102440 | 0.0 | 144.64745 | 7 |
ACCACCG | 80335 | 0.0 | 144.64227 | 7 |
AACACCG | 68170 | 0.0 | 144.63263 | 7 |
TCCACCG | 103355 | 0.0 | 144.62247 | 7 |
GCACCGA | 201970 | 0.0 | 144.62091 | 8 |
ATCACCG | 77925 | 0.0 | 144.61278 | 7 |
CACACCG | 81135 | 0.0 | 144.57425 | 7 |