Basic Statistics
Measure | Value |
---|---|
Filename | HNYY3DRXX_l02_n01_bc04_g99.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28158353 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTACTCT | 2774415 | 0.0 | 144.78131 | 9 |
GCTACTC | 548440 | 0.0 | 144.71483 | 8 |
TCTACTC | 805445 | 0.0 | 144.71472 | 8 |
CCTACTC | 773130 | 0.0 | 144.70119 | 8 |
ACTACTC | 652400 | 0.0 | 144.68039 | 8 |
ATCTACT | 204275 | 0.0 | 142.45978 | 7 |
CTCTACT | 222600 | 0.0 | 142.39482 | 7 |
CCCTACT | 224335 | 0.0 | 142.26625 | 7 |
ACCTACT | 197740 | 0.0 | 142.2184 | 7 |
CACTACT | 204355 | 0.0 | 142.21597 | 7 |
GGTCTAC | 36915 | 0.0 | 142.1854 | 6 |
TCCTACT | 208620 | 0.0 | 142.18242 | 7 |
AGCTACT | 133795 | 0.0 | 142.18153 | 7 |
GTCTACT | 168990 | 0.0 | 142.17522 | 7 |
TACTACT | 183700 | 0.0 | 142.16808 | 7 |
TGCTACT | 152940 | 0.0 | 142.08325 | 7 |
TTCTACT | 227795 | 0.0 | 142.0658 | 7 |
CGCTACT | 159615 | 0.0 | 142.046 | 7 |
GACTACT | 110885 | 0.0 | 142.03857 | 7 |
GCCTACT | 159580 | 0.0 | 142.0181 | 7 |