Basic Statistics
Measure | Value |
---|---|
Filename | HNYY3DRXX_l02_n01_bc04_g5.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27204680 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CATAGGT | 2691170 | 0.0 | 144.97446 | 9 |
TCATAGG | 793965 | 0.0 | 144.94841 | 8 |
GCATAGG | 472135 | 0.0 | 144.93234 | 8 |
ACATAGG | 652090 | 0.0 | 144.92996 | 8 |
CGCATAG | 147010 | 0.0 | 144.76045 | 7 |
ATCATAG | 198705 | 0.0 | 144.75508 | 7 |
CTCATAG | 231955 | 0.0 | 144.72343 | 7 |
TCCATAG | 210245 | 0.0 | 144.71292 | 7 |
AGCATAG | 114450 | 0.0 | 144.70085 | 7 |
GTCATAG | 148645 | 0.0 | 144.6996 | 7 |
CACATAG | 211305 | 0.0 | 144.66972 | 7 |
GCCATAG | 143120 | 0.0 | 144.66805 | 7 |
TGCATAG | 122940 | 0.0 | 144.662 | 7 |
TACATAG | 169700 | 0.0 | 144.63338 | 7 |
GGCATAG | 90055 | 0.0 | 144.52531 | 7 |
CCATAGG | 780375 | 0.0 | 144.37631 | 8 |
CCCATAG | 237905 | 0.0 | 143.75504 | 7 |
GACATAG | 110460 | 0.0 | 142.9708 | 7 |
TTCATAG | 222340 | 0.0 | 142.16855 | 7 |
AACATAG | 171530 | 0.0 | 139.70496 | 7 |