FastQCFastQC Report
Thu 17 Dec 2020
HNYY3DRXX_l01_n02_Fluc_F06.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNYY3DRXX_l01_n02_Fluc_F06.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40178
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGTCC100.007065896144.998764
ACCGTGC100.007065896144.998768
GACAGTG259.3211065E-486.999267
ATAGGGT350.003541747662.1423268
GTACAAC350.003541747662.1423263
ACACCAT350.003541747662.1423265
AATACCG350.003541747662.1423265
GTATATA450.00952562948.3931851
ATATAGT450.00957272648.332926
GGGGGGG33500.09.522306145
Produced by FastQC (version 0.11.5)