FastQCFastQC Report
Thu 17 Dec 2020
HNYY3DRXX_l01_n02_Fluc_E02.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNYY3DRXX_l01_n02_Fluc_E02.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences618555
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGCG1352.141403E-532.2210929
CCCCTCG900.003627794332.221097
GTATAAG5050.030.179171
CCAGCGC2252.8143404E-828.9989818
CCTAGGA1555.498396E-528.0635282
ACCGTGC1306.481463E-427.8836368
GACCAGC2405.26652E-827.1865466
GCTATAC2259.100877E-725.7768733
CCTAATA5000.024.6491362
TAGACCG3251.4824764E-924.53765
GTGTGCC1500.001493935924.1658179
GTATATG5750.023.9808791
GGACTGC2903.2829666E-722.499216
CAGCGCA2603.2018652E-622.306919
TAGGTAG3253.985224E-822.306915
TGCACGG1650.00260027921.9689255
ACTATGC5151.8189894E-1221.1157638
GTATAGG4201.2496457E-920.7353481
ACCTAAT5301.8189894E-1220.5397321
GAGTGTG4301.6971171E-920.2318487
Produced by FastQC (version 0.11.5)