FastQCFastQC Report
Thu 17 Dec 2020
HNYY3DRXX_l01_n02_Fluc_C09.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNYY3DRXX_l01_n02_Fluc_C09.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31094
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCAGTAC100.007058044144.999988
CGCGAGG100.007058044144.999988
ACGGCAA100.007058044144.999988
CTTCTAA100.007058044144.999981
GACGGCA259.300705E-487.07
CAAGACG350.00353405262.1428574
AGGAGTA400.00599603454.3749965
CGGGGGG750.001305975413.533334140-144
GGGGGGG64800.010.628858145
AGGGGGG4251.2034616E-76.8235297135-139
TAAAAAG3150.00127597155.9841275130-134
AAGGGGG4001.0356328E-45.7999997135-139
GTATCAT4304.7423222E-55.7325583135-139
CGTATCA4951.1706836E-55.5656567125-129
AAAGGGG4006.4762705E-45.4375135-139
AAAAAGG4109.018433E-45.304878135-139
TATCATT4505.564016E-45.1555552130-134
Produced by FastQC (version 0.11.5)