FastQCFastQC Report
Thu 15 Sep 2022
HNYWNBGXM_n02_dpp_Lib2_Aug_31_2022.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNYWNBGXM_n02_dpp_Lib2_Aug_31_2022.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111053225
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACAG5327390.4797150195323009Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GCAGTGGTATCAACGCAGAGTACATGGGGGCGGTCGAGTGCCTCACAGTG1587710.1429683829533091Clontech SMARTer II A Oligonucleotide (100% over 23bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1294040.11652430625044882No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)