FastQCFastQC Report
Mon 13 Dec 2021
HNWTNBGXK_n01_DecB3_7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNWTNBGXK_n01_DecB3_7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9642080
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAAGTATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCC142940.14824602160529676No Hit
TAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCTG120180.12464115626503824No Hit
TGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAAC109220.11327431425584521No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)