[2025-03-31 03:08:03,303] multiqc.config                                     [INFO   ]  Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml
[2025-03-31 03:08:03,575] multiqc.core.version_check                         [WARNING]  MultiQC Version v1.28 now available!
[2025-03-31 03:08:03,575] multiqc.core.file_search                           [INFO   ]  Search path: /scratch/gencore/GENEFLOW/work/nf/30/5c9825157a57036025716213fe84b4/merged
[2025-03-31 03:08:03,827] multiqc.modules.custom_content.custom_content      [INFO   ]  run_stats: Found 1 samples (PlotType.TABLE)
[2025-03-31 03:08:03,840] multiqc.modules.custom_content.custom_content      [INFO   ]  undetermined_barcodes: Found 20 samples (PlotType.TABLE)
[2025-03-31 03:08:03,847] multiqc.modules.custom_content.custom_content      [INFO   ]  demux_report: Found 3 samples (PlotType.TABLE)
[2025-03-31 03:08:03,875] multiqc.modules.fastqc.fastqc                      [INFO   ]  Found 6 reports
[2025-03-31 03:08:03,875] multiqc.modules.fastqc.fastqc                      [WARNING]  Sample had zero reads: 'HNTNFDRX5_n02_MR_GeneExpression_2025_v2'
[2025-03-31 03:08:03,875] multiqc.modules.fastqc.fastqc                      [WARNING]  Sample had zero reads: 'HNTNFDRX5_n01_MR_GeneExpression_2025_v2'
[2025-03-31 03:08:04,034] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,034] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,035] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,035] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,035] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,035] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,036] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,036] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,036] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,038] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,039] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:04,040] multiqc.core.ai                                    [WARNING]  Fallback to rough estimation if tokenizers not available. Install `tiktoken` or `anthropic` to get more accurate token counts.
[2025-03-31 03:08:19,658] multiqc.core.ai                                    [INFO   ]  Summarised report with Seqera AI