Sample Encoding per_base_sequence_content Filename Sequence length kmer_content sequence_length_distribution File type total_deduplicated_percentage per_base_sequence_quality overrepresented_sequences per_tile_sequence_quality Total Sequences per_sequence_gc_content adapter_content per_sequence_quality_scores avg_sequence_length sequence_duplication_levels %GC per_base_n_content Sequences flagged as poor quality basic_statistics HNKY2AFXX_n01_ah119spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah119spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 75.4532162472596 pass fail pass 10159916.0 warn pass pass 100.0 pass 39.0 pass 0.0 pass HNKY2AFXX_n01_ah119spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah119spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 49.03575905916202 pass fail pass 43470900.0 warn pass pass 100.0 fail 39.0 pass 0.0 pass HNKY2AFXX_n01_ah7797spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah7797spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 70.42488937605157 pass pass pass 17570558.0 pass pass pass 100.0 pass 38.0 pass 0.0 pass HNKY2AFXX_n01_ah7797spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah7797spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 82.27481004196537 pass fail pass 3512701.0 warn pass pass 100.0 pass 39.0 pass 0.0 pass HNKY2AFXX_n01_ah8104spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8104spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 72.57651737401665 pass fail pass 14844980.0 warn pass pass 100.0 pass 39.0 pass 0.0 pass HNKY2AFXX_n01_ah8104spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8104spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 67.31676648000267 pass fail pass 13192509.0 pass pass pass 100.0 warn 39.0 pass 0.0 pass HNKY2AFXX_n01_ah8583spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8583spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 95.4731350462204 pass pass pass 457541.0 pass pass pass 100.0 pass 38.0 pass 0.0 pass HNKY2AFXX_n01_ah8583spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8583spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 60.66025178729129 pass warn pass 20164242.0 pass pass pass 100.0 warn 39.0 pass 0.0 pass HNKY2AFXX_n01_ah8584spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8584spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 82.38130517075669 pass fail pass 5884115.0 pass pass pass 100.0 pass 39.0 pass 0.0 pass HNKY2AFXX_n01_ah8584spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah8584spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 50.89309720016549 pass warn pass 39722447.0 pass pass pass 100.0 warn 39.0 pass 0.0 pass HNKY2AFXX_n01_ah9048spikea-100917 Sanger / Illumina 1.9 fail HNKY2AFXX_n01_ah9048spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 76.99469713994921 pass warn pass 6430192.0 fail pass pass 100.0 pass 40.0 pass 0.0 pass HNKY2AFXX_n01_ah9048spikeb-100917 Sanger / Illumina 1.9 fail HNKY2AFXX_n01_ah9048spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 80.72481994776581 pass warn pass 5567788.0 pass pass pass 100.0 pass 38.0 pass 0.0 pass HNKY2AFXX_n01_ah9120spikea-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah9120spikea-100917.fastq.gz 100.0 fail pass Conventional base calls 75.96260961457988 pass fail pass 9354160.0 warn pass pass 100.0 pass 39.0 pass 0.0 pass HNKY2AFXX_n01_ah9120spikeb-100917 Sanger / Illumina 1.9 warn HNKY2AFXX_n01_ah9120spikeb-100917.fastq.gz 100.0 fail pass Conventional base calls 86.10269499217115 pass warn pass 1555220.0 warn pass pass 100.0 pass 39.0 pass 0.0 pass