HNJM2BCX2_l02_n02_FLUB_12_REP2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNJM2BCX2_l02_n02_FLUB_12_REP2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2834062
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAGTAACAAGAGCCTACTTTGAGAAGGAGATCAACAATCACACTCAAGA	9886	0.348827936721215	No Hit
AAGCAGAGCTGTTTCCTGGGTCAGATAATGGCCTCTGTCAAAGCAAAGAA	4125	0.14555080305229737	No Hit
ATATATATCTTCACACAAATATGAAAGTCAGCTCTAGAAATAACAGAATG	4008	0.14142245300208675	No Hit
GTATTAAGGGACATGAACAACAAAGATGCAAGGCAAAAGATAAAGGAGGA	3759	0.13263647725420263	No Hit
GATAATGGCCTCTGTCAAAGCAAAGAATAGTTGTAGAGACACAAACTGGG	3750	0.13231891186572486	No Hit
GTCTAATTGTCTCCCTCTTCTGGTGATAATCGGTGCTCTTGACCAAATTG	3681	0.12988424388739556	No Hit
GTATGAACAGTTCCTCAAATAGCAACTGTACGAAATACAATTGGACCGAT	3448	0.12166282883013851	No Hit
GTAGTAACAAGAGGATTTTTATTTTAAATTCACAAGCACTGCCTGCTGTA	3361	0.1185930300748537	No Hit
ACATTACGCATATCCCTTTTTATTGTCAAACGGAACTTCCCTTCTTTCTG	3075	0.1085015077298944	No Hit
TAACAAAAGTGAGCCTGAAAGTAAAAGGATGTCCCTTGAAGAGAGAAAAG	2903	0.10243248030565315	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTAAC	6400	89.82103	2
GTAGTAA	6515	88.80599	1
AAACACG	3890	80.31509	5
AACACGT	1445	79.24825	6
ACACGAG	2430	79.040146	7
GTAACAA	7335	78.26986	4
AACACGA	2520	78.22919	6
TGACGCC	615	77.810455	145
TAACAAG	7755	73.75045	5
AGTAACA	7925	72.628334	3
ACGAGCA	1165	70.923	9
GAAACAC	4430	70.688614	4
CACGAGC	2645	70.42317	8
ACGAGCC	1080	63.754086	9
TAGAAAC	6915	60.69755	2
AGCACGC	585	58.249985	1
GTAGAAA	8275	52.21942	1
GCCGACC	500	52.203743	145
GCACGCA	680	51.170204	2
ACAACGC	1120	49.82885	8