FastQCFastQC Report
Wed 16 Oct 2024
HNJLWDSXC_l04_n02_horvitzi_A_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNJLWDSXC_l04_n02_horvitzi_A_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCATCAGTTTGCGCACATAATCCAATTGTAGAATTCAAATTGTTTC11.2048192771084338No Hit
GGACAGAACGTGATCGTGAGCGTGATGGACTTCTCCTCTTTTTAACCGGC11.2048192771084338No Hit
AACCAAGAACGTTCTTGTTGAGTTCTACGCTCCATGGTGCGGACATTGCA11.2048192771084338No Hit
AAAAGAGGAAATAAATGCGCAAGACCAAATATTTAAATCAAGATAACTAT11.2048192771084338No Hit
CTTCTCGAGAGCTGGGTTCTTGGCGAGATGTCCACGGAGAGCCTTGCGGA11.2048192771084338No Hit
CCACGACCCAGTCCATCCATGTTGGCGCATCTCTTCCACGACCCAGTCCA11.2048192771084338No Hit
CTAGGGTATTGGTTGCTGACTTACAGCACGCATCGGCTACTGAAACGGTT11.2048192771084338No Hit
TCTGGAATACTAACTCTTTTACCTGAATTGTCTCCATGTAATGCTTCTGA11.2048192771084338No Hit
ATTCGAGATTGATATCTGGGTAGATTGATTCCACAAGGAACAAACGAGCA11.2048192771084338No Hit
CGGAAAGGGAGCTGACCGTGAATTCAAGGGACTCGCAGATTGCCTTGTCA11.2048192771084338No Hit
TGTTGGTGCAAATGTATGTTGGAGCGGGTATATTTAGTCTTTCTTGTGTT11.2048192771084338No Hit
CGGCCATCTGAGCAGCCGAGCACGATGTTGACAAAGAGTTGAGCGAGGCT11.2048192771084338No Hit
TTTTCTTCTCCAATTCCGCCGCTGTTTGGTAATCGGAGAACTTTTGCTTC11.2048192771084338No Hit
CCGAATAATAGTCAAGGCAGAAGCGAGAATGCATCCACTGGTGGCAATAT11.2048192771084338No Hit
CCCAATCATATTCCCTCCCGGAACTTCATTATCCTCAGCTTCCATCAATA11.2048192771084338No Hit
ATTTTTATTAAATAATCTAAAATTTTGTCTTTTTATTTATACATAACAAT11.2048192771084338No Hit
CGGAGCAATTTGACAAGCAAATCCACAGCGTCATCGGTCGTTTGTTGCGA11.2048192771084338No Hit
CCGCTTAAGGAGTAGTCAACTTGGCATGACTCGTCATGGTTGGAGTACAC11.2048192771084338No Hit
CGAGTAAGAAGTTTGATATCCAGCTAATGTTGGGTAATAAACCGGGTCAA11.2048192771084338No Hit
TGGGAATCCTGGCTTTCCAGCTGGTCCATCATTTCCATCCTTTCCTGGTC11.2048192771084338No Hit
TCGATTTCTACCGATGTTGTCGACAAATACGGAAATTTAAAAGTATCGTT11.2048192771084338No Hit
GGAACTTTAAAAAATCAAAAATAGGGTGAAAGCGGTGCTCTGCCTATACC11.2048192771084338No Hit
GTTCATCATCGGAGCTACCAACAGACCGGACATCATTGATCCAGCTGTTC11.2048192771084338No Hit
CCAAAACAAGGACCACCAGGAAAGGATGGAGCTCCAGGATATGATGGAGG11.2048192771084338No Hit
CAAAAGGGGAGAAACTCGAAAAGGCGTTAAAACAATAAAGGAAGATTTAA11.2048192771084338No Hit
AGACGCCGGAGCCCCAGGAGCCCCAGGACAACCAGGACAAGCCGGATCCC11.2048192771084338No Hit
GTGAAAATTGCAATGCCTACAGTCCAAAGAGCGCACTTTTATTTAAATCA11.2048192771084338No Hit
CGGAAGAGGCGGCTGAAGCGGAAAAAAGACGATTGGCGAAGGAGGCGGAA11.2048192771084338No Hit
TTTGGGTTTTGGCAGCGTCTTCCGATTGATCTTTGCTATTTAATAGCAGA11.2048192771084338No Hit
TAGGCTCGGCTCGTCATCCGCTCAGCGGAATGGCTTCGACGTCAGCGGCT11.2048192771084338No Hit
TCAGTTAAAAATTATTATTATCGAATGGTTAAATTGTGGTTTTCAAAATA11.2048192771084338No Hit
CGGCTTGGTTGGGATGAGCTCGACAATTCCGGCATCTCCAGACTTCAAGA11.2048192771084338No Hit
TCAAAAATGACGATTGCAACAAAAGTGAACACAAGTAAAAAAGAGCATAA11.2048192771084338No Hit
GTGAATTTATCGTGGGACCGGAGGGCTTATTTAAGCAAAACGACTTGGTC11.2048192771084338No Hit
GCAAATTGGGGCAAGTTGTTATGGGAGTGAAGGCTGTGAGCATTCATGAG11.2048192771084338No Hit
GTTGGAGACTATTGAAAAGAACACCCTGCAGAGGCATTGCTTCATGACAA11.2048192771084338No Hit
GGAATTTCGAACAATGGGGCTGGAGATGTGAGAGAGAGCAGCAATAAACC11.2048192771084338No Hit
CGAGGTTTGAATGGACTCAGATTGGAAAAAATGAACAAAAAGAAAAAGAA11.2048192771084338No Hit
GGGAGAGACTGGAGAGATGGTTGGAGTTATCAAGAAGAAGGATGCTATTC11.2048192771084338No Hit
TAAAGGACAATGGTTCGGCGACCGACTTTACAATCCAAGCCAAAGAGGTT11.2048192771084338No Hit
TCATGATGCCACCAGAACAGTTTTCGAGCAGATTTGTTGCAAAAACGAAA11.2048192771084338No Hit
CACGGGCTGAACGAAACAAGTCTGCCACCTCTCGACCTGGAAATCGCCTT11.2048192771084338No Hit
CCGGATTCGGAGCCCCTCGTGATGTCAACTACAAGACCAAGGGAACCGGA11.2048192771084338No Hit
CGCCAAATGAAACCAAACCTGAAGCTGAGACCGCCGGAAAGACAAAGTCC11.2048192771084338No Hit
GTGATTTAGCGCCCCGACATTGAACCAGAGTGATCTGGCGTTGACAAGCA11.2048192771084338No Hit
GTCATATCCTGGACCAGAGCGTGGTGGTGGACAATGGTCGCACGATCCTG11.2048192771084338No Hit
GTCTCTGCTTCCACTCCAGCGATTTCACGTTCTCTTGAACTCTCTATTCA11.2048192771084338No Hit
CAGCATAGTCATTTGTGACATTTATTAATTAAAAAGAATGAATAAAATCG11.2048192771084338No Hit
GCCAGAGTCGGCACTACAAGAGGATGTATATGCATGCGCTCTTGCGAAAC11.2048192771084338No Hit
GTCATTTGAATCATCATCATCATCTGCGCGAAAGTCCGACTCTTCATCGT11.2048192771084338No Hit
AAAGAATCCAAATGTTCAAGTCTTTCCAGTTGAGCCGTTCGAGTCATCGG11.2048192771084338No Hit
ATGATCGTACAGTCCCATATTTGCCAATGAAATTCTCTCGCAGTGCTCAT11.2048192771084338No Hit
TAAGGATTTCTTCCATTCCGCTCCAAATCCTTACAGATAAGGATGGGAGC11.2048192771084338No Hit
GCGGAGTTGTTTAGCATCTACCAAATTTCGTTGATATTTTAAATGCACTT11.2048192771084338No Hit
ATTCAATGCTTTACCCATTTTTTTCTTCCCGTTTAATATCTTCTTATTTT11.2048192771084338No Hit
GTTCGCTATCGCAATCGAGTCAATATTTAGCCTTAGATGAAGTTTATCAC11.2048192771084338No Hit
GTTCGATTAATTGCCGCGGCAGCTTCACATCCATTCACCGTAGGATACAC11.2048192771084338No Hit
CTTCTGTTCCTCTAGTCACCATAAATGCCGGATCGGGTATTAGTTTGGTA11.2048192771084338No Hit
GGAAAGCCGAAGGAGCAAGTCGATGCTTTCAAGAAGAAGATCCAAGGATG11.2048192771084338No Hit
CTTGAGCCTTCTTAGCATCACGGGCAGCAACATAAGCGCTGTGATCGGAC11.2048192771084338No Hit
CTCGTTCTGCGGAAAGGAAGCCATGAAGAGACAAGCTGCTGGAATCTGGA11.2048192771084338No Hit
CCGGTATGTTTGACACGAATGCAATGAGAAAAACGCTTGCATTGGTATTT11.2048192771084338No Hit
TAAGAAGTGAAGATGGAGATGGTTATGGTGGGATGTCGATTGACCAGTAC11.2048192771084338No Hit
ACCAAAACAAGAAGGCTCACCGCAATGGAATAAAGAAGCCAAAGAACCAC11.2048192771084338No Hit
GGACCACCAGGACCATCAGGAGCCCCAGGACAACCAGGAAGCGCCGGACA11.2048192771084338No Hit
GAAAGGAGACAGTTAAAACTCCAAAACAGGGTAACTCGTGGGGCGGTGCA11.2048192771084338No Hit
TGTCTTTGTCTGGTTTTGTTATTACAGTAATGTTGGCCTCATAGGGTGAG11.2048192771084338No Hit
GTTACTTCTTGGGTGGTAGATGGTGGGGCTACTTGCCCAGTTGGTGGACT11.2048192771084338No Hit
GCACCCTCTTCATCAGCAATTTGGCTCCGAGTGTTTCACAGGCCGATTTG11.2048192771084338No Hit
ATTCCCATTTCTTCCTCCTCCTCGCCTTTCACTTCCTTCTTCGCCCCATA11.2048192771084338No Hit
ATGGAAGACCAGGACAAGCTGGACCAAACGGACCACCAGGACCACAAGGA11.2048192771084338No Hit
GAGCCGGGCGCGGATCGCCCGGCGGGGTGACGAGGTGGAGCGCGATCGGG11.2048192771084338No Hit
TCCTTCACATTCTTTAGATTCAACGGATTTTGAAGTTATGACACCATCGG11.2048192771084338No Hit
GTTGATTTTTCATCGTAGCATCGAAACAATTGGTAATCTCATCCAATCCT11.2048192771084338No Hit
GAACCATTCAGCTTTCATCTCGAGGTGAGACTTGGCGCGAACCTTGATGA11.2048192771084338No Hit
CAAAATCAAGACTTTACCAAGTTCAACCCGTTGAAACCGAAGTTGTTGGA11.2048192771084338No Hit
GTGGGATGCGGTGCTCGATAAAACTGACGAATTCTTCCAAGGTGGAGTTG11.2048192771084338No Hit
AACTGACTAAGTTTTGCCATATCTTCTCGCAATCTGGCTTTTTCATCGCG11.2048192771084338No Hit
CTCCAGTGTTTGGATCTAAATGCTAGTAGATTCAATCTTTTTAGTCGTTA11.2048192771084338No Hit
GCTCAAACAACACAACCAATTAAACCAATACTCAAAATTGCATAAACTAT11.2048192771084338No Hit
GAAAAGGAAAACGGTGCGTCCGTTAATTTCTCCACGTCCGGTGACAACAG11.2048192771084338No Hit
AACAGGTTCAAGAACCTTGCTTTCTTCGTCGGTGAGCGAGCTAACGAGGG11.2048192771084338No Hit
ATGGCTGAAGTTTTGGAAGATTGGAATAAGGGAGAACTCGATTCATTCCT11.2048192771084338No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)