FastQCFastQC Report
Wed 16 Oct 2024
HNJLWDSXC_l03_n02_QG5348_POOLRET81.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNJLWDSXC_l03_n02_QG5348_POOLRET81.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTAGACTATGTGCCCAATTTCGATCAGTTTGACGCGGGCGCTTTTTTC42.5No Hit
CAAAATCATTGGTACTTTCTATAGAACAAACAACTTCTTTCTTCTGAGAT31.875No Hit
CCTATGTATGGCCTTGGCTTCGTAGTGAACTCTGCGAAGCTTGCCAACGC31.875No Hit
TTTGATGATGGATATGAAAACTTGACTAAGGTGACGGCAAAAGGAAGTAA31.875No Hit
CTTGATCATTTTAGGACAAAATTAGGTAATTTTCGGCTAGTATTCTAGGT31.875No Hit
ACTTGTGCTGAAATTAACAAAAAATACTGCAATTAGCCAATGTAAGGGAT31.875No Hit
AGAAAACATACTCTTTCTCTATATAGATCACCTGATAATAAAAATAGTAT31.875No Hit
AAAATGTGTCAACTGATAAATGTTTTATCATAATATCAGAAGTGTTTTGT21.25No Hit
ATTAACTATCAAAACACCATCATTGCAAGACTAGAACAAGATCGCGAAAT21.25No Hit
CTGAAAATTTTCTCTCGGCCCGGCCCGGCCCGGGCCGGCCCGGGCCGAAA21.25No Hit
GGACCAATGAGCAGCGTAACAGTGCAACGTCAACCGATCTTACCAATTCT21.25No Hit
ATTTTTTCTTAGCGGAATTTCCCATTTCTGAACTATTACTATTAATTTCT21.25No Hit
CCTTGTCAGACAGACTTTCTAGTATAGTCATCATGTGAATTTTCGCTTCA21.25No Hit
TCAGCTCAGATCTGAAATTTCGCAGCTAAAAATTCACATTTTACCATTTC21.25No Hit
GAAGGGTCTGGAAGGAATTTTTTTTTTGATGGCCTAGTTTTTGGGGTTTT21.25No Hit
AGAAATTCAGAAAATTGAGAAAAAAGTCGAAGTTTCCGATTTTTCAGTTT21.25No Hit
GCTTTCAATGTCTCCCGCCGAAGCATGGTGTATCAAGAATATGGGTTCCC21.25No Hit
TGTAGTCTTTGTAGTTTTTAGTCTTTTATATTCGGAAATCGCGAAAAAGC21.25No Hit
GGACCGTTCTCTCTCACCTATTCATAGTCCCGACTGAGCTCTATCAGATT21.25No Hit
GACAATGTTGTAAACATACATGTTGACGGAAAACAACAAGAACACATCGA21.25No Hit
AAAAAGTAGGAGTGTTAGTTGGAGACTTACCAATCGTCCAGTTGCTGATT21.25No Hit
TCCATTCTTTTCTTTCTAATAATAACAAGAACGAAAACTTACCAACATCT21.25No Hit
AATTTTTTTCATAAAAAACTTTAAAAATATTGGAAAGTTTCAAAACTGAC21.25No Hit
AGCATCAACCAACTGGCCAATCGTTCCAACCACTGGAGCCAATCCTTTTC21.25No Hit
ATAGTCTTTCAACCTTCTCGCCTACTTATTCATATTTATTCTAATCCTTA10.625No Hit
CTTTTTGCTACTTACTTTCCCAGGAAGATCTAGGCTCTAGGCTACGAATT10.625No Hit
AAAAAGGGACCTAACAGGTTGCATAATGCCCATCTGACCTGGCACACACT10.625No Hit
TAAAGAAAAAATGGAGCTGTGGAAGAGAAGCGCCGGTAGCCGCAACCGGA10.625No Hit
GATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACA10.625No Hit
GAATCCAAAACCTTCAAAATTTCCAGCGAATCCTTCTGGTCCAGAAGTAC10.625No Hit
AAAAACTCGGCCAGCTATTGTTAACAAAATCAATTATATTTCGGTTTAAT10.625No Hit
GAAATTCAGAAATTCAGAAATTTAATAATTCAGAAATTCAGAAATTCGGA10.625No Hit
AATTGAATGAAATGGATCATGATAGGTGAGAGTTTTCTGTAATTTCCTGT10.625No Hit
CCTCACGATCACACTCTTCCAACTTGAACATGCAATTATGGACACTGATT10.625No Hit
AAACAAATGATTTTGTTGAATTATCGAATTTTTAGATGCATTATGTGGAA10.625No Hit
GTCAGATTCGTCTGATTTAGTTAAAGAATTGAAGAGCAAAATGGACAACA10.625No Hit
GAAAACAAAACCTAAACAAAACATTAATTCATCCATTTAACACAATTCGG10.625No Hit
GTTAAACGAGCCGACAAGCACGGTGAAACCTTCTTCTACGCGACATTCAG10.625No Hit
CAAAAAGAACGTTCGAAAAAAAAAGAATTTGTATGAATAAAATATCGGGA10.625No Hit
AAAATGTTTCTAAAGTAAAATTACGCAGAAAATCTGAATTTGATATTCAA10.625No Hit
TTGATATATTCGCTTACGGTCTTTATCCATATATCTTCCTTTTTCGGTGT10.625No Hit
ATTTTTTGCAAACACAATCATGTCAAAATGCAGATAAATTTTGCTTGCAA10.625No Hit
CGGTTGGTGCGTCCTGATCGGGCTGATATCCGTGTGGATTTCATTCCAGC10.625No Hit
TTATTATCACGGAAACACAATTTTACTAATAGAAGGAACTCAGCATAAAA10.625No Hit
CTCGAATGTATTTCAAAACACAGACTACAACTAACTACATCCTAGTTAAG10.625No Hit
GTGACCTAGGTTTAAATATTTGGGTCGTGACCTAGATTTCACTTTTTAGG10.625No Hit
CTCAATTCTTTCGTGATATTTGCAGGTTAAATTGATAGATTGGCGATGTT10.625No Hit
CTGAAAGCTCACCGATGAGCGATTCGATGATGAATCAGGTGAGCAGTGAA10.625No Hit
GTCTGAATACGGTCGGCCCCTCGAAGCGACAAGCCTAAATAGCGCATATT10.625No Hit
ATTTATTCTCGAATACATTTTTTCGAATTTCAATTTTCAGTCTATTCAAG10.625No Hit
CGAAGTTATCAAGTACACTCCTATTCATTCCTAGGCTCTCTTTCCTTCTA10.625No Hit
CTAAAAAAGTATATGACAAAATTATCACCGTTTATACCAATAACATTTTA10.625No Hit
CCACTTCCTCACCAAAGCCCCCACCACTAGTACCACCAAACTCCTACGCT10.625No Hit
GGATAGACCCAATTATTAAAATATATCTGTTCAATTGACATATTTGATGC10.625No Hit
GAATCCATCTAGGATACGCGCGCATTCGGAACACTCGATTCAGCCTCTCC10.625No Hit
ATTTGAAATTTCTGGTTTTCGGATTTTTAAGAGTTTTTTTTGCATTTTCC10.625No Hit
AGTGTGTCCTACGGTCCGCCCACTATTCCCTTGTTCTATGGACCCCGAAA10.625No Hit
GATTGCCTGGAAAGTTTGATAATGATTCTAGTCTTCAAAAAATATCAAAC10.625No Hit
GGGCCGAATTAGGCCGATTTTCAGGCCCGAAGCCCAATTTTTTTTTCAGA10.625No Hit
GGGCCCTTCTATCAGAGGGGCCCTCCGAGAGGAGCTTGGAATAATAGGAC10.625No Hit
TTTTGCGAAGAAGGTGGACGGAGTACATCATTACTTTTGTAACCATGCTG10.625No Hit
AAAGAATACTTTTATTTTATTATTTTTTTGTTGAATGTGGTCTCAAAATC10.625No Hit
GCTTCCTCTCGTAGATCATCACTTCACTGCTCCTTCCAACTTTGAGCACG10.625No Hit
ACGACACCCTACTGTAGCGAAAACATCTGACTCGTACAGAAAAAAAACGC10.625No Hit
TCATTGAGGCGGCGGCTTGTGGAACATGACGAGAGAGTGAGAGGATCAGC10.625No Hit
CATTTTGGTTGCAATAGTTGTTTTGTTTGATATTGCTCAAGCTCAATGTA10.625No Hit
GTTCTTGACTTTTTCCGTAACAGGTCATCGTGCTCTTTTCCGAGTGTTGC10.625No Hit
CAGTGAAATGACGATCGAAGTGTTTCTCACAAGTTCTTTCCGTTCTAACA10.625No Hit
CAAGCGATAACGCAGCTCAGAGTGGATCAAATCAATTGTAACTTAGTCAG10.625No Hit
CCCTAAGCCAATTATGCCAATTAGTTCTCCTCAGGCTTCAGTTTGAGCTC10.625No Hit
AAAACCAAAATATTTTACAGTCACAAACTAAACAAAACTGTTTGAATAAA10.625No Hit
TTTACAAAAAGAAATCAGTCAACATATTTTGTATACATCAGTCGGTTAGC10.625No Hit
ATTGTTTAAAATCAAAGATATGTGCAAGAGATGTGCAAGGAATGGTCAAT10.625No Hit
GGGAAAGATCGCTTTGTGAGTAGCAACATGAAGTAACTTTGGTAGTTTAA10.625No Hit
CAGATCTCAATCAGCTCGTACCTACCTGGAAAGAAATGTCGAGAAATTCG10.625No Hit
CTGTCCTTCAACCACTCCATCAAGGCTATGCAATTGGGTGACAAACTTTG10.625No Hit
AGTTACGTACGCCAACAATCCTTGGGGAACGTTTGTGAGACAAATTGGGA10.625No Hit
CTCTCCCGTGTAAAAGCACTCAAAAGGGGGTCTGCGCTTAAGAACGCTTG10.625No Hit
CAAAAAGAACGTTCGAAAAAAAAAGAATTTGTATGAATAAAATATCGGTA10.625No Hit
GTTCCACAGGTCCTCTAAGGATCTAAGGATCTAAGGATCTAAGGATCTAA10.625No Hit
CGACACCTTTCCGCACTTCACGCTGCAGGTACCCCCTTCCCATATAATTG10.625No Hit
TTTGATGATGGATGTGAAAACTTGACTAAGGTGACGGCAAAAGGAAGTAA10.625No Hit
TGAAGAGGGAGATGGAGGCAAATCGGGAGGAAATTCAAATATTGTAGGGA10.625No Hit
ATGATTGCTTTCTTAATGTGATTATAAGATGGTCCGTCGCATTTTGTACA10.625No Hit
CACCACACAGCCAAGTTTGAGCTCAATTATTTCAATACCTATGCAAGAAA10.625No Hit
GTGAGAAATAAAGGTTTTGTTGACTTTTTCCCAACACATGGCTGGATATC10.625No Hit
AGAATCTAGATCTTGAGTTCACGGAATCAGCAACTTTTTGGACCATCTCA10.625No Hit
GAATACGGTCATCAGAATGGTCACATGTGTCGTATCCAACCTAAAAGTAT10.625No Hit
AAATTGCAAAAATATATAAGTAATCCTTGACTAATCCTTCCTTCCAAAGC10.625No Hit
GCGCAAACGACACTCCGCCGCTCGTTCGAACCAGGAGAGAAGCTGGATAG10.625No Hit
TTCACCCAGTATTTTGTCGTTTTTTGCCTCTTTTTTCCATCCATTTTCCA10.625No Hit
GCTCGGAGTTGTTTCATCTGTACTTCTCGCGGCATCTGTTCTGAACCGTT10.625No Hit
GTCACAGCTTTTTCCTCCGTGGCGAACAGCAACAATTCAATATTTTTTAA10.625No Hit
CTGGCGACCATTTCACCCTTTTTCGGTGACATTTGGTGGTGGTGGACTTG10.625No Hit
CTGAAAATTTTCTCTCGGCCCGGCCCGGCCCGGGCCGGCCCGGGCCGGAA10.625No Hit
CATTTTGTAGAAAATGTCAAAATCTATCATAAAAATTAAAAAAAGTACCA10.625No Hit
GATAAAACTGGACAAAGTCAAACGGCTAGAATATAGATAAACCATCCGGA10.625No Hit
ATTTGTCATGTTATATTCAGAATTTGATTAAATTTGAAATTTCAGACAAT10.625No Hit
CTCTTCAAACCCTCTGACTCATTTTTATGTTTGTTGGTCTACTATTTGTA10.625No Hit
CAAGGCCTCTAATCATTAGCTTTACCGAATATAACTGCCGGAGATCCAGC10.625No Hit
ACGAAACCTCAAGAAAGCAGTCGACCGTTCGGCCCTGAAAGACAAGAAAG10.625No Hit
TGAAGTTTTCGGCAAATTATCATTGACTATATTTATCATTGACTATAGTG10.625No Hit
TTTACTGCTTTCGTAACCGAAACTAATATCTGCCAAAAAAAATGGAATCT10.625No Hit
CGGAAAATTCTGGTCCTCCTTAACCCCGAAGATGCAAGACCGAAGCTCTA10.625No Hit
CTAACAGATAACAGCAAACGAAAAAAAAATCAGTACTTTGATGAAGGTTC10.625No Hit
GAAAAAGAATGAGGAAATCAAAACTATCACCGCCAGATCAACTCAACTAA10.625No Hit
ACCTATTTATTTCTTGTGACGAAACCAACACAAGTTTTATGAACGGTTTT10.625No Hit
ATCTACCACAGGAGCCGAGATAAATTGGATGAATTTAACGGTTTGGGTGG10.625No Hit
AATTCTGAAGACAAATTTTGAATTGGTCTTGAAATTTTCAACACAATACT10.625No Hit
CCCAGATGCAGCAGCAACAACAACCTCCGGCGATAACAGAAATAGCGAAA10.625No Hit
GTTATCGTAGTTTTTAAGATATGCGAGTTTAAAGTTGGCGGGCCTCTTCT10.625No Hit
TTTCAAAAAAGTCACTTTTTGATTTTGGTAATTTTTGACAAAGTTGTTTT10.625No Hit
CTCGTGTTGCCACGAGATAGAGATGCCTCCCGACACCGGGAAGCAAGAAA10.625No Hit
ATTAAGCCAACCATCCGACGAATGAGATTTCTGAGCCACTGCTTTCTCGA10.625No Hit
CCGCATTTAATTTTTTTTTACTATGGACATCCTTGGCCCTAGCTGATTCA10.625No Hit
GGTCACGAAATTTGCATAACTTGCGAATTTCTCAATTTGATAGGTTCCCT10.625No Hit
AATCTGGGAACTTCAGGAACTGATAATCTATAGAAACTTGCAAGGCAAGA10.625No Hit
CTTCCATAAGAGATACCGAAAATCTGTTTACAAATAAAATGTTTGTCATA10.625No Hit
TTGGGGCCTAGCTGGAGGTTTCTGGGCCCCAAGGCTCAAAAATCGTAATT10.625No Hit
TGTGTTCGGCGGCGACGTCTTTGGTGGACCATTCTTTGGTGGCTCTGGAG10.625No Hit
GAAAGATATCAAAAAGTTGTCAACTAATAAAATGTTGCTGATAATATGAT10.625No Hit
GAACAAGTTCAAAAATGAACTGTAAAAAAATTGAAATATTAAAAATTAAA10.625No Hit
TTTCGGAATTTCTGAATTTCTGAGTTCCTGAACTTCTGAATTTCTGAATT10.625No Hit
GGTCTCTCTCTCTTTCTTTCTCTTTATCTCTGACCGTGTCCTGCTATTTC10.625No Hit
GAGAGAGATCTTCAAAAAGAATGCGAATACACGTGCACCAGCTTCCATAA10.625No Hit
CGATGAAAACGCTATTCTTTCTTTTCAGCTGCATTTAAAGAGATATGGGT10.625No Hit
GTCTCACTATCAGCACCAACGTCTTGCGTTTTGTGTCTTCACCTTCTTCT10.625No Hit
TTTCTGAAAAATGCGCTCTAAAGTGATATCTAAAAATTGTTAACTACAAA10.625No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)