FastQCFastQC Report
Wed 16 Oct 2024
HNJLWDSXC_l03_n01_QG5348_POOLRET81.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNJLWDSXC_l03_n01_QG5348_POOLRET81.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATACGTAATCGTGACCGTCACGTTTTCCCTTTTTCCGAATAACCTCCAA42.5No Hit
GCTTCAAAAGCTGCTTATTTTTTTCATTTTTGAAAATTTTTTATTTTGAG42.5No Hit
TCGACAATTTGAGAGTTATAATATTCCAAATGGATGTAGATGAAGAATCT31.875No Hit
CGCAGTATAAGAGGACTGCTCTACTGAATACAACACCTTGACCAAGAGAC31.875No Hit
AAGATACGCAGACAGCTAAAGTGTCTGGATGGCTGGGTCTAAAGAGCTAG31.875No Hit
ACACATTGCACACCTTCTGCGAGATGACGTGGCTTTCGAATTCCTGGGAA31.875No Hit
GACCAGACTCCTGGCAATACACAAAGCCTGGCTCGACTCGTTGTACCTCT31.875No Hit
CGATCACGTACCGCCCTTGGCCAGTAATACTGTGACGATAGCGACTTCTT31.875No Hit
GCATGGAGATGTAGACGAATCAGATCGGAAGAAGGATGAAGATAGTGAGA21.25No Hit
ACTCAATCGTACCGATATCCGCATTAGGTCTCCAAGGTGAACAGCCTCTA21.25No Hit
AAAGTTAACAGTTCAAGTGGGCTTCTGAACGTTCAATTATTTAAAACTCA21.25No Hit
TTTTTGAATTGGCGGGAAACTGAAAAATTCAAATTTTTTAGACAAAAATG21.25No Hit
AAATGTTTATTTGATTATGAACTATCATACAAAGATGTTCGGAATGACAT21.25No Hit
CTGAAATCATTTTTGGCGGTCGAAACTCTGCTAGTGTTGTTCGTGAAGTT21.25No Hit
TCTTTATTTTTATGCCAATCTACATGCATTTCTGCACATTTTGATGCAAT21.25No Hit
GGAGATGTCGAAAACGAATCAGGAATTGGGAAGTGCAAATTTGTTGAGAT21.25No Hit
ATCTTTTATCAGTTGTCTAGGACCAAAAGAAGCATTTCTACCAGCTTCAT21.25No Hit
TTTTTGTTTTTTTAGGCATAGGCTTACTAGGAAAGGGTCTGAAGGTGCCA21.25No Hit
TAGACTGCAAACTGCAAACTACAAACTACAAAGTTAAACCGGTTGGTGGG21.25No Hit
GATTCTTCGTTTAAAATAGTGTCATCTCTCTGAATTCGTCCCTTTTCTCA21.25No Hit
CAGTACTCGATTTGGGAGCTGGGCCTACAGTATACCTTCCGATTGCATTG21.25No Hit
ATTTCAAGGAAACATTGTTTTGGTTTACTGGTAGTTTCAATTAGATTCAT21.25No Hit
AATAAAATCCAAACGTTTTTAGAACAATTGATTGTTTTACATTTCCATTG21.25No Hit
TTCCCATAGAAACATTTTCAGGGAGTCCTTGACACAATCTCTGGCGAGAC21.25No Hit
TCAGAATCTCAGAATCTCAGAATCTCAGAATCTCAGAATCTCAGAATCTC10.625No Hit
TTTTTGAGCTAAAAATGGTGGAAATTGACTCGGAAATGACTAAAAATGAC10.625No Hit
GATTTTCAAGGGCCGAAGTTTGAGAGGATTTATATGGATTTATCGAAAAT10.625No Hit
ATCTCTTACAACAGAATATTTTTTTGGATAATATTTCAAAAGTGGATATT10.625No Hit
CTGAGACAGATTCAAGTTTGGCTTTCGATTCGGTGGCTTGAGTGATATTG10.625No Hit
GTGGTCAGAGACGCAGTGTGTCTCGTTGTCTGCGTCTCTCCAAGTGGCTA10.625No Hit
AATTATCAGAATATATGGTATTGGGATATTAAAAATCTATTGTGAACGGT10.625No Hit
TTGACTTTTTCGCCGATCGGGAATTTGAGAATTTCCTTGCAAAAATCGAA10.625No Hit
ATTTGGGCTTCTATGGCGAATAAAAAAATGTAAATGTTAGAACGGAAAGA10.625No Hit
TTTATAGAAACCGAGATATATGCGCTTAAACTTAAGTCAGGAGATCCTTC10.625No Hit
TTCAGCAACTCATCTTCAGTTTTTTTTGGTCAAAATGTTTCCAATTTAAG10.625No Hit
GAAAACTGGGAGAGATATCGGTTCGAACTGGTATGCCACTGTGTTCTATC10.625No Hit
GTGGGGCTTGGGATTGGCTGTTGCGTGGTGTGCGAATCCGATTCCGATCG10.625No Hit
CTAAGAAAGTTTCGGTAAGTTGAAAACATTTAAATGATTTTGAAAGTTTA10.625No Hit
AAAATTGTCTTCATAATCAACCAATCCAGAAACCAACAATCAAATAAAAA10.625No Hit
AATTACCCTCTGTGTGTCCTGACTTGATAATGAAATTGTCTGAAATTTCA10.625No Hit
AAAATGAAATAAAGTGGATATAGTACAATCCGTGTACTCCAAAAACTTTT10.625No Hit
GGAATAATTTGTGATTTTTGAGGGTTTTTTTACATTTTTTTTTAATTTTC10.625No Hit
ATCTCGGAGAGCCAATAGAGCGTGCACAATCAATTCTTCTGGAGAGGCTG10.625No Hit
TGTGAAGATCATTTTTTAAACATGATCGAGAAGAAAAACAAAAAGTATTG10.625No Hit
CTGCGGGCCTGCCTTAATTAGTTGTTGAATGGAGAGCACACCTGCTGCTG10.625No Hit
CTTAGCCAATTGCCATGAGATAAGTGTCAAAAAGACAACACCGGAAACAT10.625No Hit
AAGATGGAGCAAGAAAAAACATGGGAATTTATTGGACACTTGTCAGTATG10.625No Hit
TACGAATTTCGTATAGTCAGAAGAAGTAAAAATGTAGGAGAGAAGAGCAC10.625No Hit
CAAGACAATGGGGAAAATTGACAACAAGCCCATCACAGTTTTACGACCTC10.625No Hit
TAACAACTTTTGCGCATCTTTTTAACTGAGCGAACTACAAGCGTTTGAAA10.625No Hit
CATTTTATCCCAGTTCCCGGCAAAGATATCAAAGATGTGTCAACTGATAA10.625No Hit
TGTGTAACTATCTATTTTTTCGTGTAACAATCTATTTTTTCGTGTAACAA10.625No Hit
TTAGACTCACTTCTATTGAAGAAAGGCAGAGAAGCGAAAACCAGAATGTG10.625No Hit
CGATTTTGAAAACCCATTCAAATTAACAGCGAATGATCTATTGGCCCTCA10.625No Hit
TGTAAAAGGTATCAAAAAGGTACCAACTAACAAAATGTTTATCATATTAT10.625No Hit
GTCTTCCACAAGCCTATTGAATTGTCTTTGTGCTTGACGACCACGAACTT10.625No Hit
AAAAACTTTTAAGACTGAAAAAATCAAATGTCAAAAAGCCTAAAAATTGG10.625No Hit
ACTCGGAGGTACCATAGAAAAATAAAAGAGCCAGCCCTTCTAATACAGGT10.625No Hit
AAAAAATCTAAAATTCAGAAATTCAGAAATTCAGAAATTCAGAAACTCAG10.625No Hit
GATCTATTGTTCCAAGGTACCTCCGGAGGGTCTTCCTATTACAGGGATCC10.625No Hit
GTCAAAATCTTTTAAGTCTCGAAAAAGATGTCTGGAATTTATCCAATGGT10.625No Hit
AATTGATAAATGAGAATTCGTAGCCTAGAGCCTAGATCTTCCTGGGAAAG10.625No Hit
CTACGACGCATCGGAATTCTCTTGAATTATCCGAATTCGATTCTCAGAAG10.625No Hit
GAGGAGGAGCCTGATGTCAAGCACGGACCACCAAAGTTTGTCACCCAATT10.625No Hit
CTTTTTTGCACTTTTTTTGAAATTTCGTTCTTTCTCAATTTTAAAAAATA10.625No Hit
CTCTTAATAGTTTTCTGGAAATATGTAACAGAAAACGTATATTTGGGAAA10.625No Hit
TCAAGGAGCTAAAAAATTCGTTTTTGACATTTTTCGAATTCCCGCCAAGA10.625No Hit
ACACCTTGTTTCGATTATGTACGGAGAAAGTGATATTTGGTACTGAAACA10.625No Hit
AGAGGAAAAAAAGGAACTAGAGGAAAAAAATTCTCTTTAATTTTTAATAT10.625No Hit
TTTTAGACCTTTTTAGGTTTTTCAGCTATTTTCAAAGATTCTTTTTCGAT10.625No Hit
TTTTCACATAAATGGTGCAAATTTTCGTATTCTCTAGATGATGTTGTATC10.625No Hit
GTGTGACTGACTAGGAGTTTTTGGTTTTTATTAGTTTTAAACTATTTCAT10.625No Hit
TGTTATACGTGTCAAAACCTGTAGACATGTCTGAACTCGCACCTCTTCTG10.625No Hit
GTATTCTCTCCAGTTTTAAAATTGTTATATACTTCAAAACGCACTAAATT10.625No Hit
GGCTAAAAAGAGGTAAAGCTGAAGTTTTTTTGAATTTTGAATATCAAATT10.625No Hit
GTTTTTCTCTGAATCCTAAAAATAAAAGTAACGTCTTCTAACTAAAACAT10.625No Hit
CTTAGATCCTTAGATCCTTAGATCCTTAGATCCTTAGAGGACCTGTGGAA10.625No Hit
TATAACAGAAATATTAACACTTTCTGAATATTTTTTCCCAAAATTAAAAC10.625No Hit
AACTAACGAGACTAAAAAACAAAGCAACAAAAATGATATAATCATAAAAC10.625No Hit
GCACGTATGCGATGATTCAAGCTAAAAGTGTTTCATTTTTCAGAAAGAAA10.625No Hit
TATGTCTAGAACGCAACTGTGAAGTATGCTAACTATTGTATCGATAAATT10.625No Hit
CCCTTCCTTCTTTGATGACAACAGTATTCTTCTTCCCCTCTTTTCTTTCT10.625No Hit
GTCTAGTTAGATGTTTGCTTAACTTGCATCACATGTGTTAACCCCCGGCA10.625No Hit
GTTTCAAAAAATAGACCTCTAAATATCAGGAAAGAACACATGAGACTGAC10.625No Hit
GGGTATATCTTTAGACATAAATCTATTGGGAGCACGAAAATTGGTAGAAA10.625No Hit
ATTTTAGGTAGAAGGCTACTACACAACAAACGGATTGGCAAGTACGCTTA10.625No Hit
CTGCTCCCAAACAGGGAACCACACCAAAAGAGCTGAAAGCGAAAAAGGAT10.625No Hit
GACGCAGACAGTTAATCGAAATATTTCTCTGCGTCTCCACCGAATATGCG10.625No Hit
TGTTTAAAGAGGTAGTCAAACTTGGAACAAGTTAAAAATGTTTGTTTTTA10.625No Hit
TTTATATCGTCCTTGAATGATTTATAATCACTATTAGTAGATTTTTCTTA10.625No Hit
TTTTCAAAACTTGTGGAATGACAGGCCCGCGGGCCGGGGCGGGCCGGGGC10.625No Hit
TATGATTTTTAAAAAATACATAATCAAATACAATTCGTTTTCTCGAAACG10.625No Hit
ATCAGCGGCGGCTCGTTTCCGCGAAAGTGCTCCATGATGCTTGAGAGTTT10.625No Hit
AAACTCGAAAACCTCAGTACGAGAAAAAACACGTTTGTTAGTAATTGATT10.625No Hit
CTTCCTTCGAAGGCACATGTCATATCGCCAAATAACCAATAGTCGGAAGG10.625No Hit
ATACTTTGAATATAAGAATAGAGGCATATAAGGAGGAGATAAAAGAAAAA10.625No Hit
ATTTCTGAATTTCTGAATTTCTGAATTTCTGAATTTCAGAACTTCTGAAT10.625No Hit
GAGCGCCGTCGGCGCCGCCGCTCCGGCGAGACAGTGTGTGGGGAGAGGAG10.625No Hit
TTCTTCTTTTGTATGCTGTAGTGTGTTTTCTTCTATGATTGGGCTGGGCA10.625No Hit
ATTGAGTACGAATTAGCTATATATCGGCAGAGAGGAGCTCGTCCGAAAAA10.625No Hit
GCCAAAAATCTAAACAGCGAGGTTAGATGGACTTTAAATGCCAACTCAAA10.625No Hit
GTCAGCTGCTGACTACAGTAGGGTGTTGCTTCTAGAATCGGAGACTGATA10.625No Hit
AGTGCGTTTGGGTGCAGAGTTTGCTGTTAGTGGTGGTCTCTCACGTTTTG10.625No Hit
ATCTCGGTTCTTATAAAAGATACTCGAAATTTTTCAATTAATAAAATGTT10.625No Hit
AGTAGCAACCGGCCACAGAATAACGGTTCAGAACAGATGCCGCGAGAAGT10.625No Hit
GAAGAAGTTAACTAAATTTTTTTTCAGCTTACCTATGATTATCAATTCGA10.625No Hit
AAATTATTCAGTGAAGCTTTGCAATCTTAAAAAAAAATGAAAATTTTAAT10.625No Hit
GATCCTTCGCTAGCAACTGTTCTTCTCGAGAAAGCAGTGGCTCAGAAATC10.625No Hit
GCCCTTCAAAACAATTGCAAAAGATGAAATCTGCCACTTACTCGGATACA10.625No Hit
TCCAAAACGACATCAGAACACATTTCGTATAAAATGAAGCGTTCAAAAAA10.625No Hit
ATCGATCGGTTTCTATGCGAAGATCCTTTAATAAAAGGTCATCTTGGGGA10.625No Hit
ACCATTTTAAATACTAAAAACCCGGAACAAAATTTATTTCTGACCACTCT10.625No Hit
GTTCCGGATGGTTTATCTATATTCTAGCCGTTTGACTTTGTCCAGTTTTA10.625No Hit
TTTGCGAATCGGAAATTCTGTGAATCTGAACGACTCTTTGGACTGCTTTT10.625No Hit
TTTGTGCTTGTCATTCCCCCTATATAGATTCTAACCCCCTTATCCCCTAA10.625No Hit
CGTGAGACAGGTTAGTTTTACCCTACTGTTGACTTGTTATTGCGAAAGTA10.625No Hit
TGGGGTAGGAAGAATCCGAAAATAGGCGCCCGTCGTTTCTCTCTATTCGC10.625No Hit
TTTAAACCCTGCATAACCGTCATCAAATGGTTGATTATCCGACGAAATGT10.625No Hit
CAAAATTTTGAAATTGTGGAACCGTAGACGATGACAAACCTGCTCTACTG10.625No Hit
TTTTCACATAAATGGTGCAAATTTTCGTATTCTCTAGATGAGGTTGTATC10.625No Hit
GTTTTTTTTAGAAATCTGATACTAGAGTTTTTTGCATGTGTTTTATTCAA10.625No Hit
AGCAGTTCGGACATTGGCAGCCGAAAGCCGAGAGGAGGCGCAGGCAGATA10.625No Hit
GGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCTTCCGAAGTTT10.625No Hit
GAAAACTCGACGAAACGCAGCAAAAAACAAGAAAAATAATGCAGAGAATG10.625No Hit
CTTTGACACATTGTGTCAAAGTAAGTTCCAAATTTCAATGTTATCAATGT10.625No Hit
TGGATTTTTTATTTGAAAAGAAAGCAGGTGATTCACATGGTTGCTACGGA10.625No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)