HNHJVBGXX_n01_bgm18.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNHJVBGXX_n01_bgm18.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32198192
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC	775042	2.4070978892230968	TruSeq Adapter, Index 2 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	82940	43.916767	1
ATCGGAA	83760	43.852818	2
CGATGTA	82660	43.545723	34
TCTCGTA	82810	43.509033	41
ACCGATG	82940	43.50763	32
CGTATGC	83085	43.50306	44
CTCGTAT	82865	43.491013	42
TCGTATG	83125	43.47976	43
CACCGAT	83140	43.478947	31
CGTCTGA	83960	43.469883	16
ACACGTC	84125	43.46131	13
CCGATGT	82960	43.396183	33
TCGGAAG	84590	43.396133	3
TATCTCG	83035	43.323666	39
GTCACCG	83645	43.28107	29
ACGTCTG	84485	43.221066	15
CGGAAGA	85170	43.11626	4
ATCTCGT	83745	43.0424	40
TCACCGA	84250	42.994373	30
CACGTCT	85675	42.667347	14